Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL2P13500 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL2P13500 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 AC093827.2-201ENST00000512654 315 ntBASIC16.77■□□□□ 0.28
CCL2P13500 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL2P13500 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCL2P13500 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCL2P13500 AL135905.2-201ENST00000584934 1404 ntBASIC16.77■□□□□ 0.27
CCL2P13500 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL2P13500 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CCL2P13500 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL2P13500 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL2P13500 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL2P13500 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL2P13500 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL2P13500 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL2P13500 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.76■□□□□ 0.27
CCL2P13500 AL160286.2-201ENST00000567150 934 ntBASIC16.76■□□□□ 0.27
CCL2P13500 AC233702.5-201ENST00000584107 538 ntBASIC16.76■□□□□ 0.27
CCL2P13500 AC073195.1-201ENST00000607241 877 ntBASIC16.76■□□□□ 0.27
CCL2P13500 AL353708.3-201ENST00000610272 989 ntBASIC16.76■□□□□ 0.27
CCL2P13500 AC113410.3-201ENST00000623366 203 ntBASIC16.76■□□□□ 0.27
CCL2P13500 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL2P13500 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 AC005332.7-201ENST00000614046 2005 ntBASIC16.75■□□□□ 0.27
CCL2P13500 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCL2P13500 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL2P13500 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 KSR1P1-201ENST00000446298 240 ntBASIC16.75■□□□□ 0.27
CCL2P13500 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL2P13500 CD177P1-201ENST00000606252 935 ntBASIC16.75■□□□□ 0.27
CCL2P13500 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 AL049637.2-201ENST00000641778 930 ntBASIC16.75■□□□□ 0.27
CCL2P13500 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 KRT16P1-201ENST00000399124 1418 ntBASIC16.75■□□□□ 0.27
CCL2P13500 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCL2P13500 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL2P13500 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL2P13500 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL2P13500 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL2P13500 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL2P13500 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL2P13500 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 MIR718-201ENST00000390190 70 ntBASIC16.74■□□□□ 0.27
CCL2P13500 AC012618.2-201ENST00000428058 849 ntBASIC16.74■□□□□ 0.27
CCL2P13500 TSPY7P-201ENST00000431358 1114 ntBASIC16.74■□□□□ 0.27
CCL2P13500 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL2P13500 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.74■□□□□ 0.27
CCL2P13500 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL2P13500 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL2P13500 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.74■□□□□ 0.27
CCL2P13500 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL2P13500 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.74■□□□□ 0.27
CCL2P13500 AL445675.2-201ENST00000620291 557 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms