Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL4P13236 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 AP000523.1-201ENST00000398242 1049 ntBASIC18.16■□□□□ 0.5
CCL4P13236 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.16■□□□□ 0.5
CCL4P13236 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.16■□□□□ 0.5
CCL4P13236 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.16■□□□□ 0.5
CCL4P13236 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL4P13236 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCL4P13236 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL4P13236 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCL4P13236 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
CCL4P13236 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL4P13236 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL4P13236 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL4P13236 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL4P13236 VENTXP5-201ENST00000523979 775 ntBASIC18.15■□□□□ 0.5
CCL4P13236 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.15■□□□□ 0.5
CCL4P13236 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 NEK4P2-201ENST00000580004 1012 ntBASIC18.15■□□□□ 0.5
CCL4P13236 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.15■□□□□ 0.5
CCL4P13236 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL4P13236 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL4P13236 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCL4P13236 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCL4P13236 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL4P13236 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
CCL4P13236 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL4P13236 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL4P13236 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL4P13236 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL4P13236 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL4P13236 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.14■□□□□ 0.49
CCL4P13236 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.14■□□□□ 0.49
CCL4P13236 AL121894.2-201ENST00000602977 491 ntBASIC18.14■□□□□ 0.49
CCL4P13236 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
CCL4P13236 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCL4P13236 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CCL4P13236 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL4P13236 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL4P13236 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CCL4P13236 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.13■□□□□ 0.49
CCL4P13236 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.13■□□□□ 0.49
CCL4P13236 ZNF815P-204ENST00000434898 1737 ntBASIC18.13■□□□□ 0.49
CCL4P13236 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
CCL4P13236 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.13■□□□□ 0.49
CCL4P13236 KRT18P48-201ENST00000434763 852 ntBASIC18.13■□□□□ 0.49
CCL4P13236 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.13■□□□□ 0.49
CCL4P13236 KRT126P-201ENST00000549467 1181 ntBASIC18.13■□□□□ 0.49
CCL4P13236 AL136038.3-201ENST00000561909 1096 ntBASIC18.13■□□□□ 0.49
CCL4P13236 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.13■□□□□ 0.49
CCL4P13236 AC083849.1-201ENST00000615227 514 ntBASIC18.13■□□□□ 0.49
CCL4P13236 HYMAI.1-201ENST00000620949 238 ntBASIC18.13■□□□□ 0.49
CCL4P13236 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms