Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.72■□□□□ 0.59
PCNAP12004 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PCNAP12004 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.72■□□□□ 0.59
PCNAP12004 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.72■□□□□ 0.59
PCNAP12004 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNAP12004 AL032819.2-201ENST00000624543 2162 ntBASIC18.71■□□□□ 0.59
PCNAP12004 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.71■□□□□ 0.59
PCNAP12004 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCNAP12004 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCNAP12004 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNAP12004 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.71■□□□□ 0.59
PCNAP12004 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PCNAP12004 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.71■□□□□ 0.59
PCNAP12004 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.71■□□□□ 0.59
PCNAP12004 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.71■□□□□ 0.59
PCNAP12004 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNAP12004 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCNAP12004 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
PCNAP12004 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 ESRRAP1-201ENST00000400596 1257 ntBASIC18.7■□□□□ 0.58
PCNAP12004 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.7■□□□□ 0.58
PCNAP12004 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 KRT8P8-201ENST00000434750 1448 ntBASIC18.7■□□□□ 0.58
PCNAP12004 TUBB8P6-201ENST00000436895 1288 ntBASIC18.7■□□□□ 0.58
PCNAP12004 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.7■□□□□ 0.58
PCNAP12004 AC069544.1-201ENST00000609399 999 ntBASIC18.7■□□□□ 0.58
PCNAP12004 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 AC093503.3-201ENST00000624917 2352 ntBASIC18.7■□□□□ 0.58
PCNAP12004 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCNAP12004 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCNAP12004 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNAP12004 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNAP12004 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PCNAP12004 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.69■□□□□ 0.58
PCNAP12004 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.69■□□□□ 0.58
PCNAP12004 AC233263.1-201ENST00000578059 224 ntBASIC18.69■□□□□ 0.58
PCNAP12004 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCNAP12004 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNAP12004 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCNAP12004 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNAP12004 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms