Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.26■□□□□ 0.83
RTN3O95197 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.26■□□□□ 0.83
RTN3O95197 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.26■□□□□ 0.83
RTN3O95197 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.26■□□□□ 0.83
RTN3O95197 C2orf69P3-201ENST00000565542 1120 ntBASIC20.26■□□□□ 0.83
RTN3O95197 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.26■□□□□ 0.83
RTN3O95197 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RTN3O95197 AC145285.6-201ENST00000604632 637 ntBASIC20.26■□□□□ 0.83
RTN3O95197 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RTN3O95197 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.26■□□□□ 0.83
RTN3O95197 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.26■□□□□ 0.83
RTN3O95197 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN3O95197 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.26■□□□□ 0.83
RTN3O95197 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
RTN3O95197 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 AC096733.2-201ENST00000609937 1394 ntBASIC20.25■□□□□ 0.83
RTN3O95197 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.25■□□□□ 0.83
RTN3O95197 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RTN3O95197 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.25■□□□□ 0.83
RTN3O95197 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.25■□□□□ 0.83
RTN3O95197 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN3O95197 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 CYP2D8P-201ENST00000433633 1490 ntBASIC20.24■□□□□ 0.83
RTN3O95197 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.24■□□□□ 0.83
RTN3O95197 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 KRT8P41-201ENST00000533985 1514 ntBASIC20.24■□□□□ 0.83
RTN3O95197 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN3O95197 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN3O95197 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.24■□□□□ 0.83
RTN3O95197 AC010947.1-201ENST00000623454 693 ntBASIC20.24■□□□□ 0.83
RTN3O95197 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN3O95197 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 ZNF815P-204ENST00000434898 1737 ntBASIC20.24■□□□□ 0.83
RTN3O95197 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTN3O95197 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTN3O95197 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.24■□□□□ 0.83
RTN3O95197 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 LINC01568-207ENST00000641790 1380 ntBASIC20.23■□□□□ 0.83
RTN3O95197 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RTN3O95197 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.23■□□□□ 0.83
RTN3O95197 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTN3O95197 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
RTN3O95197 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 MFAP1P1-201ENST00000442257 1255 ntBASIC20.23■□□□□ 0.83
RTN3O95197 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.23■□□□□ 0.83
RTN3O95197 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RTN3O95197 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN3O95197 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTN3O95197 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN3O95197 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTN3O95197 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms