Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTNND1O60716 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CTNND1O60716 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.48■■□□□ 1.19
CTNND1O60716 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.48■■□□□ 1.19
CTNND1O60716 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.48■■□□□ 1.19
CTNND1O60716 GABARAPL3-202ENST00000624044 1851 ntBASIC22.47■■□□□ 1.19
CTNND1O60716 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CTNND1O60716 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.47■■□□□ 1.19
CTNND1O60716 AC112907.2-201ENST00000448639 330 ntBASIC22.47■■□□□ 1.19
CTNND1O60716 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.47■■□□□ 1.19
CTNND1O60716 KRT126P-201ENST00000549467 1181 ntBASIC22.47■■□□□ 1.19
CTNND1O60716 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.47■■□□□ 1.19
CTNND1O60716 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.47■■□□□ 1.19
CTNND1O60716 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
CTNND1O60716 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CTNND1O60716 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.47■■□□□ 1.19
CTNND1O60716 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
CTNND1O60716 AL391422.3-201ENST00000603791 2761 ntBASIC22.47■■□□□ 1.19
CTNND1O60716 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.47■■□□□ 1.19
CTNND1O60716 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.47■■□□□ 1.19
CTNND1O60716 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.47■■□□□ 1.19
CTNND1O60716 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTNND1O60716 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.46■■□□□ 1.19
CTNND1O60716 AC104417.2-201ENST00000562989 1793 ntBASIC22.46■■□□□ 1.19
CTNND1O60716 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.46■■□□□ 1.19
CTNND1O60716 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.46■■□□□ 1.19
CTNND1O60716 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.46■■□□□ 1.19
CTNND1O60716 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.46■■□□□ 1.19
CTNND1O60716 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.46■■□□□ 1.19
CTNND1O60716 GCSHP2-201ENST00000560971 527 ntBASIC22.46■■□□□ 1.19
CTNND1O60716 HYMAI.1-201ENST00000620949 238 ntBASIC22.46■■□□□ 1.19
CTNND1O60716 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CTNND1O60716 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
CTNND1O60716 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTNND1O60716 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.46■■□□□ 1.19
CTNND1O60716 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CTNND1O60716 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CTNND1O60716 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.45■■□□□ 1.18
CTNND1O60716 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.45■■□□□ 1.18
CTNND1O60716 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.45■■□□□ 1.18
CTNND1O60716 KRT18P48-201ENST00000434763 852 ntBASIC22.45■■□□□ 1.18
CTNND1O60716 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.45■■□□□ 1.18
CTNND1O60716 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.45■■□□□ 1.18
CTNND1O60716 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.45■■□□□ 1.18
CTNND1O60716 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.45■■□□□ 1.18
CTNND1O60716 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CTNND1O60716 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTNND1O60716 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTNND1O60716 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTNND1O60716 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CTNND1O60716 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTNND1O60716 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTNND1O60716 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CTNND1O60716 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.44■■□□□ 1.18
CTNND1O60716 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.44■■□□□ 1.18
CTNND1O60716 VENTXP5-201ENST00000523979 775 ntBASIC22.44■■□□□ 1.18
CTNND1O60716 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CTNND1O60716 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.44■■□□□ 1.18
CTNND1O60716 ZNF444P1-201ENST00000559497 298 ntBASIC22.44■■□□□ 1.18
CTNND1O60716 MIR4674-201ENST00000582457 87 ntBASIC22.44■■□□□ 1.18
CTNND1O60716 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.44■■□□□ 1.18
CTNND1O60716 AC083849.1-201ENST00000615227 514 ntBASIC22.44■■□□□ 1.18
CTNND1O60716 AC093458.2-201ENST00000623150 629 ntBASIC22.44■■□□□ 1.18
CTNND1O60716 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CTNND1O60716 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTNND1O60716 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.43■■□□□ 1.18
CTNND1O60716 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
CTNND1O60716 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTNND1O60716 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.43■■□□□ 1.18
CTNND1O60716 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.43■■□□□ 1.18
CTNND1O60716 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTNND1O60716 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CTNND1O60716 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.43■■□□□ 1.18
CTNND1O60716 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTNND1O60716 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.43■■□□□ 1.18
CTNND1O60716 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.43■■□□□ 1.18
CTNND1O60716 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CTNND1O60716 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CTNND1O60716 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
CTNND1O60716 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CTNND1O60716 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CTNND1O60716 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CTNND1O60716 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms