Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCL13O43927 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.24■□□□□ 0.35
CXCL13O43927 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL13O43927 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CXCL13O43927 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL13O43927 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCL13O43927 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL13O43927 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL13O43927 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 MIR1238-201ENST00000408483 83 ntBASIC17.23■□□□□ 0.35
CXCL13O43927 FAM207BP-201ENST00000447172 505 ntBASIC17.23■□□□□ 0.35
CXCL13O43927 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCL13O43927 SLC25A1P4-201ENST00000567977 778 ntBASIC17.23■□□□□ 0.35
CXCL13O43927 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCL13O43927 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCL13O43927 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CXCL13O43927 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CXCL13O43927 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCL13O43927 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CXCL13O43927 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.22■□□□□ 0.35
CXCL13O43927 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCL13O43927 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 AL390955.1-201ENST00000428694 934 ntBASIC17.22■□□□□ 0.35
CXCL13O43927 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 AC097488.1-201ENST00000507834 756 ntBASIC17.22■□□□□ 0.35
CXCL13O43927 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.22■□□□□ 0.35
CXCL13O43927 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCL13O43927 DGCR10-201ENST00000609839 495 ntBASIC17.22■□□□□ 0.35
CXCL13O43927 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.22■□□□□ 0.35
CXCL13O43927 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CXCL13O43927 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CXCL13O43927 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCL13O43927 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCL13O43927 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCL13O43927 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CXCL13O43927 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CXCL13O43927 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCL13O43927 Z82202.1-201ENST00000623446 1880 ntBASIC17.21■□□□□ 0.35
CXCL13O43927 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 CRYGFP-201ENST00000418459 633 ntBASIC17.21■□□□□ 0.35
CXCL13O43927 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.21■□□□□ 0.35
CXCL13O43927 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.21■□□□□ 0.35
CXCL13O43927 AP000692.2-201ENST00000608391 879 ntBASIC17.21■□□□□ 0.35
CXCL13O43927 AC073912.3-201ENST00000624414 853 ntBASIC17.21■□□□□ 0.35
CXCL13O43927 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.21■□□□□ 0.35
CXCL13O43927 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
CXCL13O43927 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCL13O43927 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCL13O43927 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CXCL13O43927 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.21■□□□□ 0.34
CXCL13O43927 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.2■□□□□ 0.34
CXCL13O43927 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CXCL13O43927 MMP23A-201ENST00000234610 1017 ntBASIC17.2■□□□□ 0.34
CXCL13O43927 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCL13O43927 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCL13O43927 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms