Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDX4O14627 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDX4O14627 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDX4O14627 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDX4O14627 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDX4O14627 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CDX4O14627 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX4O14627 DRAXINP1-201ENST00000437611 948 ntBASIC18.56■□□□□ 0.56
CDX4O14627 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX4O14627 AP002469.2-201ENST00000531724 424 ntBASIC18.56■□□□□ 0.56
CDX4O14627 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX4O14627 TPSP2-201ENST00000561760 610 ntBASIC18.56■□□□□ 0.56
CDX4O14627 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CDX4O14627 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDX4O14627 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.56■□□□□ 0.56
CDX4O14627 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX4O14627 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CDX4O14627 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDX4O14627 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.55■□□□□ 0.56
CDX4O14627 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
CDX4O14627 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 HLA-F-220ENST00000434407 884 ntBASIC18.55■□□□□ 0.56
CDX4O14627 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX4O14627 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX4O14627 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDX4O14627 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CDX4O14627 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.55■□□□□ 0.56
CDX4O14627 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CDX4O14627 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX4O14627 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.55■□□□□ 0.56
CDX4O14627 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 TSPY22P-201ENST00000427496 604 ntBASIC18.54■□□□□ 0.56
CDX4O14627 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 KRT18P31-201ENST00000506277 1292 ntBASIC18.54■□□□□ 0.56
CDX4O14627 AC079776.4-201ENST00000511039 504 ntBASIC18.54■□□□□ 0.56
CDX4O14627 FOSL1P1-201ENST00000511041 816 ntBASIC18.54■□□□□ 0.56
CDX4O14627 AP000867.3-201ENST00000524675 377 ntBASIC18.54■□□□□ 0.56
CDX4O14627 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CDX4O14627 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.54■□□□□ 0.56
CDX4O14627 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 EP400NL-214ENST00000641289 2402 ntBASIC18.54■□□□□ 0.56
CDX4O14627 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX4O14627 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX4O14627 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX4O14627 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDX4O14627 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX4O14627 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDX4O14627 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
CDX4O14627 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.53■□□□□ 0.56
CDX4O14627 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.53■□□□□ 0.56
CDX4O14627 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
CDX4O14627 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDX4O14627 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.53■□□□□ 0.56
CDX4O14627 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 LINC00265-3P-201ENST00000447588 903 ntBASIC18.53■□□□□ 0.56
CDX4O14627 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.53■□□□□ 0.56
CDX4O14627 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.53■□□□□ 0.56
CDX4O14627 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.53■□□□□ 0.56
CDX4O14627 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.53■□□□□ 0.56
CDX4O14627 LINC01711-201ENST00000598340 967 ntBASIC18.53■□□□□ 0.56
CDX4O14627 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDX4O14627 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CDX4O14627 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDX4O14627 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms