Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RN7SL273P-201ENST00000481561 299 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RPL37P23-201ENST00000492641 294 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC025164.1-201ENST00000496249 478 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 PTP4A1P4-201ENST00000512479 322 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC093853.1-201ENST00000515689 483 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC127381.1-201ENST00000555979 939 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 BNIP3P25-201ENST00000596023 559 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL670379.11-201ENST00000604059 253 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL670379.10-201ENST00000604330 253 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL022099.1-201ENST00000604551 712 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL670379.12-201ENST00000605291 253 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL670379.9-201ENST00000605428 253 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC004908.2-201ENST00000609090 574 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC245517.5-201ENST00000611529 162 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 BX005214.3-202ENST00000619809 325 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC099494.2-201ENST00000623371 978 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 ELL2P4-201ENST00000446870 1376 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AL731532.2-201ENST00000623542 1953 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 HSPE1P11-201ENST00000339579 310 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 Y_RNA.28-201ENST00000362554 111 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 RNA5SP258-201ENST00000362750 119 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 Y_RNA.187-201ENST00000363918 113 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 RNA5SP131-201ENST00000365452 119 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 MIR19A-201ENST00000384878 82 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 GCNT1P4-201ENST00000404096 329 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 MIR548F5-201ENST00000408421 86 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 PSMA6P3-201ENST00000428242 164 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 MTND6P12-201ENST00000428247 522 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC108734.1-201ENST00000439549 399 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 MRPS31P2-201ENST00000451581 518 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC126389.1-201ENST00000477436 290 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC083904.1-201ENST00000487828 231 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 SNRPCP11-201ENST00000492453 205 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 RNA5SP340-201ENST00000517132 107 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 MIR3668-201ENST00000582138 75 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC007938.3-201ENST00000604965 623 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 AC007792.1-201ENST00000623023 402 ntBASIC5.38□□□□□ -1.55
SSU72Q9NP77 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SSU72Q9NP77 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSU72Q9NP77 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC004817.4-201ENST00000602396 3625 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 SNORA62.1-201ENST00000364287 154 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 RNU6-1226P-201ENST00000384317 107 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 Y_RNA.530-201ENST00000384587 101 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 FAM183DP-201ENST00000421987 399 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 CHIAP3-201ENST00000423668 1133 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 ARL2BPP10-201ENST00000446487 531 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC020550.1-201ENST00000447385 163 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 PLGLA-201ENST00000465668 449 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 RPL23AP11-201ENST00000475260 469 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 AL135752.1-201ENST00000479477 471 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms