Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.56□□□□□ -2
CHD8Q9HCK8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.56□□□□□ -2
CHD8Q9HCK8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.56□□□□□ -2
CHD8Q9HCK8 AC091046.2-201ENST00000620775 665 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 AC006020.1-201ENST00000420179 1854 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 RPL23AP15-201ENST00000450202 459 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 MRPS31P2-201ENST00000451581 518 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
CHD8Q9HCK8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.56□□□□□ -2
CHD8Q9HCK8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 BNIP3P38-201ENST00000601117 544 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.56□□□□□ -2
CHD8Q9HCK8 AL391813.2-201ENST00000609113 322 ntBASIC2.56□□□□□ -2
CHD8Q9HCK8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.56□□□□□ -2
CHD8Q9HCK8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHD8Q9HCK8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.56□□□□□ -2
CHD8Q9HCK8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHD8Q9HCK8 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 NPM1P10-201ENST00000398310 865 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 HMGB3P18-201ENST00000406327 590 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 EIF4EP1-201ENST00000422311 642 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.55□□□□□ -2
CHD8Q9HCK8 AP001317.1-201ENST00000531194 960 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC007954.1-201ENST00000554198 494 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 OR1S1-201ENST00000624470 978 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.55□□□□□ -2
CHD8Q9HCK8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.55□□□□□ -2
CHD8Q9HCK8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CHD8Q9HCK8 AC233981.2-201ENST00000611524 1614 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CHD8Q9HCK8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHD8Q9HCK8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.55□□□□□ -2
CHD8Q9HCK8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.55□□□□□ -2
CHD8Q9HCK8 BTG3P1-201ENST00000435859 716 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.55□□□□□ -2
CHD8Q9HCK8 BTF3L4P4-201ENST00000506381 449 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AP000859.1-201ENST00000525536 307 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC018630.1-201ENST00000541376 925 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
CHD8Q9HCK8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CHD8Q9HCK8 AC110754.1-201ENST00000399740 601 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC006989.1-201ENST00000427212 131 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 ELOCP8-201ENST00000439309 332 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 UBE2V1P5-201ENST00000440070 405 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 ELOCP15-201ENST00000442090 332 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC093392.2-201ENST00000450682 337 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 OR5BN1P-201ENST00000532955 829 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.55□□□□□ -2
CHD8Q9HCK8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.55□□□□□ -2
CHD8Q9HCK8 AC093524.1-201ENST00000564266 1094 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 uc_338.32-201ENST00000615087 172 ntBASIC2.55□□□□□ -2
CHD8Q9HCK8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 Y_RNA.30-201ENST00000362572 97 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 RPL7P37-201ENST00000425095 738 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.54□□□□□ -2
CHD8Q9HCK8 AL353093.1-201ENST00000441292 436 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 AC021205.2-201ENST00000480069 347 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.54□□□□□ -2
CHD8Q9HCK8 OR4G11P-201ENST00000492842 939 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 RAC1P5-201ENST00000512182 576 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 OR4T1P-201ENST00000554933 911 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 AC092628.2-201ENST00000622492 339 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.54□□□□□ -2
CHD8Q9HCK8 AL359893.1-201ENST00000447628 1580 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.54□□□□□ -2
CHD8Q9HCK8 U8.13-201ENST00000390842 128 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.54□□□□□ -2
CHD8Q9HCK8 RPS20P5-201ENST00000434808 360 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.54□□□□□ -2
CHD8Q9HCK8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.54□□□□□ -2
CHD8Q9HCK8 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 AP003102.1-201ENST00000525638 661 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
CHD8Q9HCK8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.54□□□□□ -2
CHD8Q9HCK8 Z82195.1-201ENST00000604558 398 ntBASIC2.54□□□□□ -2
CHD8Q9HCK8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHD8Q9HCK8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHD8Q9HCK8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHD8Q9HCK8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.53□□□□□ -2
CHD8Q9HCK8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.53□□□□□ -2
CHD8Q9HCK8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.53□□□□□ -2
CHD8Q9HCK8 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 RNU6-661P-201ENST00000362409 107 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 RNU6-342P-201ENST00000384521 104 ntBASIC2.53□□□□□ -2
CHD8Q9HCK8 AL023807.1-201ENST00000407932 359 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms