Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC079741.1-201ENST00000321498 212 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 RNA5SP335-201ENST00000363817 110 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 RNA5SP171-201ENST00000391071 115 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 CYCSP52-201ENST00000422857 310 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AL359265.2-201ENST00000434367 631 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC073264.2-201ENST00000448886 166 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 SNORA84-201ENST00000459229 133 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PABPC1P3-201ENST00000469174 459 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 RPL7P49-201ENST00000471402 708 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC083829.1-201ENST00000503756 657 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 OR7H2P-201ENST00000513483 306 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 RN7SKP122-201ENST00000515923 296 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 SNORA25.14-201ENST00000516481 132 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 RNU6-307P-201ENST00000516743 106 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AL353997.4-201ENST00000586196 166 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 DHX40P1-201ENST00000588725 1412 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC011494.1-201ENST00000596454 237 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AP001485.1-201ENST00000604799 199 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC130454.1-201ENST00000622948 401 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC021753.1-201ENST00000635724 168 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC027287.1-201ENST00000553115 1453 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AL022323.4-201ENST00000623980 13120 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 IGKV7-3-201ENST00000357453 298 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.65-201ENST00000362846 100 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 SNORA67-201ENST00000384423 137 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 RNU2-50P-201ENST00000410494 143 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 Z99755.1-201ENST00000414048 380 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 RPL36AP36-201ENST00000418616 301 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AL590632.1-201ENST00000424289 371 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 RPL12P17-201ENST00000432393 498 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 RPS3AP12-201ENST00000443616 753 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 HMGB3P21-201ENST00000452483 547 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 RPL23AP12-201ENST00000467573 473 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 CBX3P4-201ENST00000538909 354 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC127381.1-201ENST00000555979 939 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC090517.1-201ENST00000569307 266 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC005899.2-201ENST00000584353 90 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC011477.5-201ENST00000586571 259 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC119403.2-201ENST00000590960 598 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AL031320.1-201ENST00000604177 357 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 U2.14-201ENST00000615943 113 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AP001282.2-201ENST00000616149 309 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC244100.1-202ENST00000621554 382 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 MIR6830-201ENST00000636015 70 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AC006213.6-201ENST00000623722 4179 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms