Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 AP001350.1-201ENST00000601906 1524 ntBASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.56□□□□□ -1.68
SSBP3Q9BWW4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.149-201ENST00000363558 117 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.188-201ENST00000363952 111 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RNU6-702P-201ENST00000364982 107 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.301-201ENST00000364990 103 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 SNORA5.1-201ENST00000384275 131 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RNU6-784P-201ENST00000384330 106 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.476-201ENST00000384347 108 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 MIR514A2-201ENST00000385131 88 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 MIR514A3-201ENST00000385132 88 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RPS26P40-201ENST00000435209 294 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 CBX1P4-201ENST00000439415 457 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RPS11P7-201ENST00000442125 465 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL137792.2-201ENST00000443484 235 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL035551.1-201ENST00000446931 348 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC011225.1-201ENST00000457751 369 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RN7SL188P-201ENST00000469842 285 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 UBA52P3-201ENST00000491303 382 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC091885.1-201ENST00000506658 268 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 FAM206BP-201ENST00000510179 541 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC009902.1-201ENST00000519351 183 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 HAUS8P1-201ENST00000549005 542 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL356432.3-201ENST00000568952 465 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC092807.2-201ENST00000609367 243 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 RMST_9.1-201ENST00000619945 193 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC022418.1-201ENST00000624118 445 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC135068.12-201ENST00000637370 931 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AC074101.1-201ENST00000637861 241 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 AL031595.2-201ENST00000624215 19071 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 MTND4P1-201ENST00000457501 1466 ntBASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSBP3Q9BWW4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 CDC27P2-201ENST00000425026 1922 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC091046.3-201ENST00000631455 1574 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNU4-66P-201ENST00000365199 138 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNU4-48P-201ENST00000365559 182 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNU6-444P-201ENST00000383988 108 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AL603908.1-201ENST00000406098 201 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNU4-14P-201ENST00000410858 122 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 GNG5P5-201ENST00000420444 220 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AL163193.1-201ENST00000444895 788 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 HMGB3P22-202ENST00000451823 572 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AL583843.1-201ENST00000456070 346 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 COPS8P2-201ENST00000473228 627 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RN7SL30P-201ENST00000488416 306 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC090453.1-201ENST00000495560 436 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms