Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AL355433.1-201ENST00000422804 300 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RWDD4P2-201ENST00000426392 563 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 PSMA2P3-201ENST00000429685 675 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RPS15AP9-201ENST00000439856 381 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RPL21P89-201ENST00000444021 467 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 AL359893.1-201ENST00000447628 1580 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.78□□□□□ -1.48
DUSP9Q99956 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AC245028.2-201ENST00000458673 253 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RPS27AP17-201ENST00000463344 455 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RN7SL727P-201ENST00000482164 296 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 GAPDHP56-201ENST00000506031 988 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 AC006427.1-201ENST00000514359 712 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 RNA5SP401-201ENST00000515920 127 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AC126177.5-201ENST00000549599 178 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AC018638.8-201ENST00000588755 281 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 GLUD1P4-201ENST00000590914 418 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 FKBP1AP1-201ENST00000594588 318 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.78□□□□□ -1.48
DUSP9Q99956 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 NXPH1-205ENST00000602349 1953 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 PABPC1P7-201ENST00000413177 1513 ntBASIC5.78□□□□□ -1.48
DUSP9Q99956 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
DUSP9Q99956 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.78□□□□□ -1.48
DUSP9Q99956 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
DUSP9Q99956 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.78□□□□□ -1.48
DUSP9Q99956 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
DUSP9Q99956 AC090971.4-201ENST00000560291 1800 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.77□□□□□ -1.49
DUSP9Q99956 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 U3.11-201ENST00000364476 212 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 MIR105-2-201ENST00000385083 81 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 RNU1-77P-201ENST00000390868 162 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 AL354719.1-201ENST00000406535 843 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 RN7SKP263-201ENST00000411194 309 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.77□□□□□ -1.49
DUSP9Q99956 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.77□□□□□ -1.49
DUSP9Q99956 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.77□□□□□ -1.49
DUSP9Q99956 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 RPS20P5-201ENST00000434808 360 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 snoU109.4-201ENST00000458953 143 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 RNU7-59P-201ENST00000459101 61 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC053481.1-201ENST00000467217 306 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 ST13P14-201ENST00000474095 734 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 RN7SL799P-201ENST00000475891 298 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 OR2AO1P-201ENST00000476497 403 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AL049874.2-201ENST00000492636 288 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC024558.1-201ENST00000505008 528 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.77□□□□□ -1.49
DUSP9Q99956 HMGB1P40-201ENST00000525121 540 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 SETP7-201ENST00000552169 453 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC007424.1-203ENST00000554613 687 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.77□□□□□ -1.49
DUSP9Q99956 RN7SL708P-201ENST00000580952 299 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 RNU4-89P-201ENST00000607443 133 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC006329.2-201ENST00000611491 394 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC244100.1-202ENST00000621554 382 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 AC138965.3-201ENST00000623875 498 ntBASIC5.77□□□□□ -1.49
DUSP9Q99956 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DUSP9Q99956 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
DUSP9Q99956 AC004817.4-201ENST00000602396 3625 ntBASIC5.76□□□□□ -1.49
DUSP9Q99956 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
DUSP9Q99956 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DUSP9Q99956 Y_RNA.142-201ENST00000363491 102 ntBASIC5.76□□□□□ -1.49
DUSP9Q99956 Y_RNA.548-201ENST00000384656 105 ntBASIC5.76□□□□□ -1.49
DUSP9Q99956 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms