Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC004690.1-201ENST00000418216 328 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 TIMM9P3-201ENST00000428659 274 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 MTND3P23-201ENST00000431980 347 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 RPL37P1-201ENST00000432310 284 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 BTF3P10-201ENST00000433415 495 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 MRPL48P1-201ENST00000445390 636 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 HMGN3P1-201ENST00000453847 193 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 Z82190.1-201ENST00000454534 490 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC017015.1-201ENST00000477387 286 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 SAP18P1-201ENST00000512058 390 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 SNORA20.3-201ENST00000516880 132 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC104986.1-201ENST00000517978 436 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AP001893.2-201ENST00000526949 202 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC133555.2-201ENST00000550213 292 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 HSPE1P3-201ENST00000559254 309 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC136624.4-201ENST00000573044 370 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 BNIP3P11-201ENST00000603878 563 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC117529.2-201ENST00000512159 2068 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 FARSBP1-201ENST00000435808 1778 ntBASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHAMP1Q96JM3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL031119.1-201ENST00000404707 1879 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 U8.3-201ENST00000363321 132 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 RNU6-289P-201ENST00000364093 107 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 RNU6-952P-201ENST00000391164 108 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 MIR320C1-201ENST00000408566 88 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL358934.1-201ENST00000432346 324 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 YWHAZP8-201ENST00000436935 731 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 SNRPEP7-201ENST00000438350 220 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 MTND5P14-201ENST00000441481 1267 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 MTND3P10-201ENST00000450967 341 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 MTCO1P42-201ENST00000457379 726 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 RPS3AP14-201ENST00000483907 780 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC026979.1-201ENST00000492525 396 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 TMEM251P1-201ENST00000503717 318 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 KCTD9P5-201ENST00000504141 1170 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 HMGB1P29-201ENST00000505659 499 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 BTF3P13-201ENST00000513224 490 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 SOD1P3-201ENST00000518682 454 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 CYCSP28-201ENST00000534284 321 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC068714.1-201ENST00000559623 800 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL391840.1-201ENST00000571144 367 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 MIR4270-201ENST00000581799 70 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC008945.2-201ENST00000606056 604 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC078899.5-201ENST00000612475 178 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 OR2L1P-202ENST00000641567 1023 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC008079.2-201ENST00000623543 20396 ntBASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms