Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ZNF705CP-201ENST00000530515 889 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC068587.4-201ENST00000533893 186 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 CYCSP28-201ENST00000534284 321 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC107016.1-201ENST00000550463 337 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC027807.1-201ENST00000559921 996 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC110743.1-201ENST00000584870 478 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC006065.6-201ENST00000625201 545 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL356473.1-201ENST00000406203 1408 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC117529.2-201ENST00000512159 2068 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC027514.1-201ENST00000588561 1603 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RNA5SP391-201ENST00000363456 119 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AL512430.2-201ENST00000406786 339 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RPL31P52-201ENST00000407532 367 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 VN1R8P-201ENST00000407739 893 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 OR8G2P-201ENST00000412796 908 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RPL12P9-201ENST00000412942 488 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC109780.2-201ENST00000413467 845 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 UBTFL3-201ENST00000418934 1024 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 C8orf59P1-201ENST00000429930 303 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 BTF3P10-201ENST00000433415 495 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AP000893.1-201ENST00000474462 794 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 UBTFL6-201ENST00000477929 1024 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AP000797.1-201ENST00000478870 387 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RPL35P6-201ENST00000490024 372 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RNU6-405P-201ENST00000516637 110 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 DUXAP2-201ENST00000519198 589 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC074029.1-201ENST00000552531 1044 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 TVP23BP1-201ENST00000557500 617 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 HSPE1P5-201ENST00000561489 272 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 MIR5685-201ENST00000579080 79 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC112187.2-201ENST00000604345 283 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AL359535.1-201ENST00000612100 1087 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC087241.4-201ENST00000612441 480 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AC068722.2-201ENST00000618734 544 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AP000648.2-201ENST00000624182 404 ntBASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SMC1BQ8NDV3 AL158163.1-201ENST00000603915 1649 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 RNA5SP130-201ENST00000364431 114 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 UBBP2-201ENST00000376781 231 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 SNORA75-201ENST00000384158 137 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 RNU6-1215P-201ENST00000384441 102 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 MIR34B-201ENST00000385076 84 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 AL121972.1-201ENST00000402023 252 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 RPS24P12-201ENST00000402084 394 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 AL590704.1-201ENST00000402856 794 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 MIR1271-201ENST00000408537 86 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 RN7SKP56-201ENST00000410513 331 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 RPL21P32-201ENST00000419877 477 ntBASIC5.37□□□□□ -1.55
SMC1BQ8NDV3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms