Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC022022.1-201ENST00000430304 178 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC104332.1-201ENST00000440471 797 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC073910.1-201ENST00000445047 438 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 REG1CP-206ENST00000447469 496 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 RPS15AP27-201ENST00000449183 343 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 RBMY2TP-201ENST00000451162 947 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC005008.1-201ENST00000456151 612 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 SNRPCP3-201ENST00000474888 476 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 MED28P2-201ENST00000475771 317 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC124945.1-201ENST00000485133 188 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC104806.1-201ENST00000508720 308 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 RN7SKP96-201ENST00000516948 297 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 RNA5SP340-201ENST00000517132 107 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC022080.3-201ENST00000544433 482 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 COX6CP3-201ENST00000580869 223 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AC119403.2-201ENST00000590960 598 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 FTX_2.1-201ENST00000618816 94 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 AL138713.1-201ENST00000624026 2130 ntBASIC6.04□□□□□ -1.44
LYSMD3Q7Z3D4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 TPTE2P4-201ENST00000258589 1605 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 Y_RNA.291-201ENST00000364886 113 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-61P-201ENST00000365528 109 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 SNORA24.1-201ENST00000384401 135 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-1093P-201ENST00000391194 107 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 SNRPEP6-201ENST00000407465 277 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 ATP5LP2-201ENST00000440646 311 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AC011816.1-201ENST00000441346 546 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 RAC1P7-201ENST00000445367 377 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 RPL23AP40-201ENST00000487630 390 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL035690.1-201ENST00000490892 383 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 HMGB1P35-201ENST00000503360 598 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 TBCAP3-201ENST00000512475 312 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-111P-201ENST00000517179 105 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 HSPE1P20-201ENST00000538133 289 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AC090615.1-201ENST00000577519 154 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL512329.2-201ENST00000607350 548 ntBASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD3Q7Z3D4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.02□□□□□ -1.44
LYSMD3Q7Z3D4 AC093775.1-201ENST00000624154 1868 ntBASIC6.02□□□□□ -1.44
LYSMD3Q7Z3D4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 BDP1P-201ENST00000582658 1990 ntBASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 GNL2P1-201ENST00000451274 2190 ntBASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.150-201ENST00000363562 102 ntBASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 SNORD14.1-201ENST00000365609 90 ntBASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-278P-201ENST00000390945 109 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms