Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 DPPA3P2-201ENST00000553589 478 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 CPDP1-201ENST00000579660 283 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 MIR4428-201ENST00000584884 73 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 AL160281.1-201ENST00000605307 311 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 AC011476.5-201ENST00000615594 130 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 ZNF299P-201ENST00000406845 1804 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 AL031123.3-201ENST00000623345 1837 ntBASIC5.59□□□□□ -1.51
TREML4Q6UXN2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TREML4Q6UXN2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
TREML4Q6UXN2 AC010401.2-201ENST00000575137 4934 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC062029.1-202ENST00000606164 3651 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RNU6-989P-201ENST00000362756 107 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RNU6-640P-201ENST00000363693 105 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RNU6-899P-201ENST00000363947 107 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 Y_RNA.219-201ENST00000364232 113 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RN7SKP128-201ENST00000364270 303 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RN7SKP55-201ENST00000364888 307 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RNU6-788P-201ENST00000390967 104 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RNA5SP155-201ENST00000411154 129 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL358176.3-201ENST00000420757 454 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 SPATA20P1-201ENST00000423089 438 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RPL23AP4-201ENST00000427757 463 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RPL23AP60-201ENST00000450011 454 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL591122.1-201ENST00000487348 492 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC015524.1-201ENST00000491585 472 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 SUMO2P18-201ENST00000518873 252 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC087369.1-201ENST00000520775 996 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC005363.1-201ENST00000530779 351 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 HSPE1P4-201ENST00000550617 308 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 RPL21P9-201ENST00000556149 474 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 SNORD39.3-201ENST00000584451 71 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AC005828.6-201ENST00000606610 232 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 FP236240.3-201ENST00000623061 327 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL136531.3-201ENST00000624378 3658 ntBASIC5.58□□□□□ -1.52
TREML4Q6UXN2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREML4Q6UXN2 AL365440.1-201ENST00000436135 2167 ntBASIC5.57□□□□□ -1.52
TREML4Q6UXN2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREML4Q6UXN2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TREML4Q6UXN2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREML4Q6UXN2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TREML4Q6UXN2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms