Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 ZNF299P-201ENST00000406845 1804 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC022819.1-201ENST00000563495 3910 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 EXOC5P1-201ENST00000510543 1969 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 MAPK10-323ENST00000641493 3207 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 Y_RNA.369-201ENST00000365568 117 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AL591034.2-201ENST00000402839 359 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC110602.1-201ENST00000437414 318 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 RPL7AP10-201ENST00000481016 791 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 RN7SL561P-201ENST00000488553 281 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 GM2AP2-201ENST00000491764 562 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 RNA5SP418-201ENST00000515951 117 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 IGKV2-36-201ENST00000519999 223 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 CYCSP25-201ENST00000525280 316 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 TRAV28-201ENST00000557548 323 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AL138895.2-201ENST00000603019 178 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 MIR6085-201ENST00000618314 110 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 FP236240.3-201ENST00000623061 327 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC073488.3-201ENST00000631611 778 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 LINC02495-203ENST00000636704 242 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 CASC19-204ENST00000641001 2055 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.95□□□□□ -1.3
VARS2Q5ST30 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARS2Q5ST30 CUBNP3-201ENST00000457461 1784 ntBASIC6.95□□□□□ -1.3
VARS2Q5ST30 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 SPATA31C1-201ENST00000420021 3895 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 AC078880.4-201ENST00000617627 1749 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 RNU4-84P-201ENST00000364200 139 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MIR188-201ENST00000385034 86 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MIR541-201ENST00000401360 84 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 RPL21P50-201ENST00000417698 477 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 RNU6-1211P-201ENST00000459179 105 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 RPL23AP65-201ENST00000475608 468 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 RNU6-64P-201ENST00000517119 105 ntBASIC6.94□□□□□ -1.3
VARS2Q5ST30 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.94□□□□□ -1.3
VARS2Q5ST30 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARS2Q5ST30 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC135776.4-201ENST00000624300 1904 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms