Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM71Q2Q1W2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 MTND4P34-201ENST00000572715 1371 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC117529.2-201ENST00000512159 2068 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 MIR506-201ENST00000384998 124 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 ATP5F1P4-201ENST00000397288 746 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 RPL23AP16-201ENST00000441715 421 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 VN1R10P-201ENST00000447106 875 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 RNA5SP246-201ENST00000458909 119 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 RPL7P22-201ENST00000466005 733 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC022034.3-201ENST00000471393 478 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 RN7SL604P-201ENST00000492589 296 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 SULT1C2P1-202ENST00000562418 459 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC053481.3-201ENST00000577881 843 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 IMMP1LP1-201ENST00000605170 488 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC112220.3-201ENST00000605502 502 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC008966.2-201ENST00000606157 453 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 RN7SKP299-201ENST00000606679 301 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC078899.5-201ENST00000612475 178 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 MTCO1P14-201ENST00000441695 1559 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 AC107068.1-201ENST00000563286 4218 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM71Q2Q1W2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RNU6-1243P-201ENST00000364028 107 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RNU11-4P-201ENST00000391149 133 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 SSXP10-201ENST00000402595 565 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RN7SKP159-201ENST00000410657 292 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RPS15AP38-201ENST00000413110 372 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC004987.3-201ENST00000413879 771 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 OR8F1P-201ENST00000425243 930 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AL606662.1-201ENST00000445763 553 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 SLC31A1P1-201ENST00000451221 567 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 HMGB3P21-201ENST00000452483 547 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RNU6-583P-201ENST00000516012 92 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RN7SKP82-201ENST00000516786 223 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RNU6-678P-201ENST00000516832 109 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 RNU1-45P-201ENST00000517191 141 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 ZNF705CP-201ENST00000530515 889 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 OR4A12P-201ENST00000530847 918 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC022880.1-201ENST00000534017 973 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC008127.2-201ENST00000549925 1075 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AL352979.3-201ENST00000553515 247 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC068446.3-201ENST00000555285 382 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC012435.1-202ENST00000568772 240 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC010546.1-201ENST00000569391 485 ntBASIC4.67□□□□□ -1.66
TRIM71Q2Q1W2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms