Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF144AP50876 AC245884.2-201ENST00000426257 404 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AL645939.3-201ENST00000435408 225 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC092647.2-201ENST00000452998 253 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF144AP50876 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF144AP50876 SNRPCP3-201ENST00000474888 476 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC114728.1-201ENST00000488289 483 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 RPL17P19-201ENST00000489069 552 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AP001086.1-201ENST00000494882 321 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 RN7SL101P-201ENST00000496350 279 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 RNU2-69P-201ENST00000516061 100 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC060775.1-201ENST00000518241 520 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 IGKV1D-22-201ENST00000518953 324 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF144AP50876 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.85□□□□□ -1.47
RNF144AP50876 CYCSP27-201ENST00000527643 293 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC025423.5-201ENST00000550230 219 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.85□□□□□ -1.47
RNF144AP50876 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF144AP50876 RPL23AP84-201ENST00000571193 464 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 MIR3133-201ENST00000583157 78 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AL022394.1-201ENST00000606979 292 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF144AP50876 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF144AP50876 AC132825.6-201ENST00000638861 357 ntBASIC5.85□□□□□ -1.47
RNF144AP50876 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RNF144AP50876 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF144AP50876 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF144AP50876 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF144AP50876 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
RNF144AP50876 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF144AP50876 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RNF144AP50876 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF144AP50876 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-212P-201ENST00000362642 104 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-1078P-201ENST00000364522 103 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 SNORA23-201ENST00000365128 182 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-398P-201ENST00000384143 109 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-886P-201ENST00000384319 105 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 Y_RNA.518-201ENST00000384552 113 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.84□□□□□ -1.47
RNF144AP50876 MIR548H3-201ENST00000408771 118 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-1156P-201ENST00000410365 100 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RN7SKP159-201ENST00000410657 292 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNA5SP111-201ENST00000411386 101 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNU2-71P-201ENST00000411395 189 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RPL23AP38-201ENST00000423801 469 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 PSMA2P3-201ENST00000429685 675 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 AC245291.3-201ENST00000443400 292 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 FTH1P2-201ENST00000466086 412 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 AP003385.3-201ENST00000472498 287 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 RNU6-397P-201ENST00000516226 104 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF144AP50876 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF144AP50876 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC109446.1-201ENST00000566172 220 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 AC130289.1-201ENST00000577321 73 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 PSMA6P4-201ENST00000603247 718 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.84□□□□□ -1.47
RNF144AP50876 MIR6813-201ENST00000621638 56 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 AC130454.1-201ENST00000622948 401 ntBASIC5.84□□□□□ -1.47
RNF144AP50876 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF144AP50876 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF144AP50876 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF144AP50876 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.84□□□□□ -1.48
RNF144AP50876 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.84□□□□□ -1.48
RNF144AP50876 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RNF144AP50876 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RNF144AP50876 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF144AP50876 SMG1P5-202ENST00000529428 4219 ntBASIC5.83□□□□□ -1.48
RNF144AP50876 SMG1P2-201ENST00000566127 4221 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms