Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC004024.1-201ENST00000549244 247 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC011611.5-201ENST00000552477 578 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC006254.3-201ENST00000603353 884 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC010591.1-201ENST00000603941 649 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC024941.1-201ENST00000612250 334 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC018816.2-201ENST00000621460 353 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 MIR6810-201ENST00000622701 70 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC110801.1-201ENST00000623590 212 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC091948.2-201ENST00000636510 279 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CR1P49238 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CR1P49238 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CR1P49238 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC021755.1-201ENST00000559747 1447 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 ZNF542P-204ENST00000482727 1305 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 RNU6-50P-201ENST00000362356 103 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RNU6-1249P-201ENST00000363237 111 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RNA5SP515-201ENST00000364570 118 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 MTND4LP20-201ENST00000402379 270 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AL035410.1-201ENST00000427409 427 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 ARL4AP4-201ENST00000434170 518 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC002542.1-201ENST00000440683 193 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 NOTCH2P1-201ENST00000443481 624 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AL034418.1-201ENST00000448675 860 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 SSXP4-201ENST00000451349 245 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 RPS27P29-201ENST00000463110 252 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CR1P49238 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 MTND3P24-201ENST00000506306 329 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 PRELID3BP5-201ENST00000508612 460 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AC119751.1-201ENST00000513357 765 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RN7SKP18-201ENST00000516005 275 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 RPL12P22-201ENST00000519073 490 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC006518.1-201ENST00000541449 943 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AL121603.1-201ENST00000553815 142 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC087481.2-201ENST00000565492 330 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CR1P49238 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC006116.10-201ENST00000591836 581 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC133794.1-201ENST00000602731 914 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AL355812.1-201ENST00000603215 216 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC068831.8-201ENST00000620171 435 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 AL357559.1-201ENST00000622228 274 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.05□□□□□ -1.92
CX3CR1P49238 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CR1P49238 MFSD8-233ENST00000641482 4860 ntBASIC3.05□□□□□ -1.92
CX3CR1P49238 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CR1P49238 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CX3CR1P49238 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CR1P49238 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 SGO1P1-201ENST00000603525 1447 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 RN7SKP280-201ENST00000364196 304 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CX3CR1P49238 RNA5SP107-201ENST00000411358 122 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CR1P49238 AIMP1P1-201ENST00000418670 937 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CR1P49238 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CR1P49238 RPL17P35-201ENST00000432217 549 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 GXYLT1P1-201ENST00000446657 490 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AC125238.1-201ENST00000448842 249 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CR1P49238 RPL12P26-201ENST00000452430 487 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 CDC42P1-201ENST00000456658 548 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 SNORD105B-201ENST00000458770 79 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 SETP6-201ENST00000479329 568 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AC068587.1-201ENST00000483613 781 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 PHBP14-201ENST00000512887 367 ntBASIC3.04□□□□□ -1.92
CX3CR1P49238 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CR1P49238 MTND4LP31-201ENST00000514859 294 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms