Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC104985.3-201ENST00000623479 597 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.9□□□□□ -1.78
NEDD4P46934 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD4P46934 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.78
NEDD4P46934 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.78
NEDD4P46934 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD4P46934 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD4P46934 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD4P46934 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD4P46934 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD4P46934 RNA5SP72-201ENST00000364442 117 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 SNORA70.4-201ENST00000365509 134 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD4P46934 RNU6-146P-201ENST00000384602 108 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD4P46934 AL357075.1-201ENST00000404107 726 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 HMGN1P24-201ENST00000412282 298 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD4P46934 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD4P46934 AL357520.1-201ENST00000441557 453 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AL591503.2-201ENST00000442314 1005 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 RPS26P30-201ENST00000443431 335 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AL606517.1-201ENST00000446914 387 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AL031313.1-201ENST00000448435 256 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 HMGB3P8-201ENST00000449709 577 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 MRPL35P4-201ENST00000453682 566 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC244505.3-201ENST00000454598 187 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC079203.1-201ENST00000487972 404 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD4P46934 AC008494.2-201ENST00000514544 370 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 RN7SKP116-201ENST00000516902 319 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD4P46934 AP001207.2-201ENST00000519490 539 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.9□□□□□ -1.79
NEDD4P46934 IGJP1-201ENST00000522682 475 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 MTND1P8-201ENST00000571424 950 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 PCNAP1-202ENST00000595299 752 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 RPP40P2-201ENST00000603596 712 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC026790.2-201ENST00000606282 430 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC024060.1-201ENST00000607052 494 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AC027449.1-201ENST00000608890 407 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.9□□□□□ -1.79
NEDD4P46934 AC110801.1-201ENST00000623590 212 ntBASIC3.9□□□□□ -1.79
NEDD4P46934 AF117829.1-206ENST00000621883 3802 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 RIOK3P1-201ENST00000418778 1528 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.89□□□□□ -1.79
NEDD4P46934 Z83843.1-201ENST00000604070 3685 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NEDD4P46934 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
NEDD4P46934 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NEDD4P46934 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 MCTS2P-201ENST00000394552 546 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 MTCO1P56-201ENST00000401674 224 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD4P46934 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD4P46934 AL158156.1-201ENST00000422509 473 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AC114973.1-201ENST00000429057 632 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD4P46934 HMGB1P45-201ENST00000435986 653 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 RPL12P46-201ENST00000436610 195 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD4P46934 MTND1P33-201ENST00000446251 917 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD4P46934 BTF3P5-201ENST00000457252 467 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 snoU13.22-201ENST00000459428 104 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 RN7SL601P-201ENST00000471221 293 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AC104689.1-201ENST00000473356 768 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 MTND6P6-201ENST00000478031 263 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AL358832.1-201ENST00000497800 389 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 AC139103.1-201ENST00000534696 1030 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD4P46934 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD4P46934 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD4P46934 MIR3944-201ENST00000581277 108 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 RPAP2P1-201ENST00000603626 1168 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AC007179.3-201ENST00000604976 235 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AL365400.2-201ENST00000605604 902 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 MIR7112-201ENST00000616126 65 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 AC009318.3-201ENST00000616916 503 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 SNORD39.4-201ENST00000620099 78 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD4P46934 AC017071.1-201ENST00000564407 2204 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD4P46934 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD4P46934 AC090971.4-201ENST00000560291 1800 ntBASIC3.89□□□□□ -1.79
NEDD4P46934 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD4P46934 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 AL133412.1-201ENST00000380194 2992 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NEDD4P46934 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms