Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNFP41002 UBE2V1P13-201ENST00000436983 439 ntBASIC5.37□□□□□ -1.55
CCNFP41002 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNFP41002 AC079781.2-201ENST00000446424 169 ntBASIC5.37□□□□□ -1.55
CCNFP41002 RPS27AP17-201ENST00000463344 455 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC063943.1-201ENST00000465434 453 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNFP41002 NIPA2P2-201ENST00000496376 1083 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AK3P4-201ENST00000504283 583 ntBASIC5.37□□□□□ -1.55
CCNFP41002 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCNFP41002 AC093853.1-201ENST00000515689 483 ntBASIC5.37□□□□□ -1.55
CCNFP41002 RN7SKP99-201ENST00000517028 307 ntBASIC5.37□□□□□ -1.55
CCNFP41002 BTF3P12-201ENST00000519620 469 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNFP41002 OR5B19P-201ENST00000531766 928 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC027544.3-201ENST00000535082 757 ntBASIC5.37□□□□□ -1.55
CCNFP41002 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC007687.1-201ENST00000602704 304 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC104695.2-201ENST00000605056 775 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNFP41002 AL118522.2-201ENST00000616045 615 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC109583.2-201ENST00000617367 129 ntBASIC5.37□□□□□ -1.55
CCNFP41002 AC132068.1-201ENST00000623805 459 ntBASIC5.37□□□□□ -1.55
CCNFP41002 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCNFP41002 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCNFP41002 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNFP41002 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNFP41002 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCNFP41002 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCNFP41002 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCNFP41002 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 MIR323A-201ENST00000362199 86 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RNA5SP319-201ENST00000362768 119 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RNU1-19P-201ENST00000363306 165 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RNU1-130P-201ENST00000363930 160 ntBASIC5.36□□□□□ -1.55
CCNFP41002 MIR143-201ENST00000385300 106 ntBASIC5.36□□□□□ -1.55
CCNFP41002 SNORD37.1-201ENST00000390968 65 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AL122016.1-201ENST00000403365 367 ntBASIC5.36□□□□□ -1.55
CCNFP41002 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNFP41002 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RN7SKP206-201ENST00000410823 293 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 RPS20P1-201ENST00000434853 354 ntBASIC5.36□□□□□ -1.55
CCNFP41002 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNFP41002 AP000281.1-201ENST00000444036 316 ntBASIC5.36□□□□□ -1.55
CCNFP41002 CACYBPP2-201ENST00000453625 678 ntBASIC5.36□□□□□ -1.55
CCNFP41002 SETP20-201ENST00000457046 852 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RPS4XP10-201ENST00000465034 731 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RN7SL51P-201ENST00000468230 285 ntBASIC5.36□□□□□ -1.55
CCNFP41002 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 RN7SL717P-201ENST00000478343 297 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RN7SL466P-201ENST00000497546 295 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC104109.1-201ENST00000498563 436 ntBASIC5.36□□□□□ -1.55
CCNFP41002 FGF7P4-201ENST00000509595 295 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC021146.1-201ENST00000511202 716 ntBASIC5.36□□□□□ -1.55
CCNFP41002 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 AC022360.1-201ENST00000521058 340 ntBASIC5.36□□□□□ -1.55
CCNFP41002 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.36□□□□□ -1.55
CCNFP41002 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNFP41002 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 HPRT1P3-201ENST00000539521 576 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC023050.3-201ENST00000541142 333 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNFP41002 OR4T1P-201ENST00000554933 911 ntBASIC5.36□□□□□ -1.55
CCNFP41002 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNFP41002 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNFP41002 UBE2L4-201ENST00000587688 464 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AL050343.2-201ENST00000607338 280 ntBASIC5.36□□□□□ -1.55
CCNFP41002 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 AC105429.2-201ENST00000610567 517 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNFP41002 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC073869.10-201ENST00000642016 354 ntBASIC5.36□□□□□ -1.55
CCNFP41002 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 AC011460.1-201ENST00000636268 1834 ntBASIC5.36□□□□□ -1.55
CCNFP41002 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNFP41002 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
CCNFP41002 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCNFP41002 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNFP41002 AC104623.2-202ENST00000623477 4002 ntBASIC5.36□□□□□ -1.55
CCNFP41002 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCNFP41002 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 AL450326.2-201ENST00000421913 1962 ntBASIC5.35□□□□□ -1.55
CCNFP41002 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNFP41002 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNFP41002 RIOK3P1-201ENST00000418778 1528 ntBASIC5.35□□□□□ -1.55
CCNFP41002 SAMMSON-213ENST00000641336 1521 ntBASIC5.35□□□□□ -1.55
CCNFP41002 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNFP41002 RPL7P26-201ENST00000333817 754 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms