Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR423-201ENST00000362201 94 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 BTF3P7-201ENST00000407097 488 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.08□□□□□ -1.92
COL4A5P29400 HIGD1AP2-201ENST00000446367 280 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 HMGN1P5-201ENST00000448591 263 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A5P29400 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 GAPDHP39-201ENST00000481866 979 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 AC008716.1-201ENST00000511084 513 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.08□□□□□ -1.92
COL4A5P29400 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.08□□□□□ -1.92
COL4A5P29400 AC007938.3-201ENST00000604965 623 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A5P29400 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 AC087565.3-202ENST00000642085 1603 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A5P29400 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A5P29400 MIR137-201ENST00000385223 102 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A5P29400 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.07□□□□□ -1.92
COL4A5P29400 AC108471.1-201ENST00000513977 287 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.07□□□□□ -1.92
COL4A5P29400 AC090281.1-201ENST00000523019 276 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 OR11H5P-201ENST00000554039 926 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 GMCL1P2-201ENST00000605230 823 ntBASIC3.07□□□□□ -1.92
COL4A5P29400 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.07□□□□□ -1.92
COL4A5P29400 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A5P29400 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A5P29400 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A5P29400 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A5P29400 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A5P29400 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL4A5P29400 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL4A5P29400 AL359511.1-201ENST00000402970 211 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AL590290.1-201ENST00000405336 380 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A5P29400 PPIAP17-201ENST00000438507 471 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A5P29400 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A5P29400 RPL9P32-201ENST00000464118 620 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 DYNLL1P6-201ENST00000503440 264 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AC034244.2-201ENST00000514668 858 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A5P29400 AL133271.1-201ENST00000538229 291 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 YWHAZP1-201ENST00000556286 722 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A5P29400 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A5P29400 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL4A5P29400 CR382285.2-201ENST00000624662 1495 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 AC245100.2-201ENST00000454544 1679 ntBASIC3.06□□□□□ -1.92
COL4A5P29400 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A5P29400 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A5P29400 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.05□□□□□ -1.92
COL4A5P29400 Y_RNA.40-201ENST00000362645 93 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 RNA5SP502-201ENST00000362694 119 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 Y_RNA.118-201ENST00000363300 101 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.05□□□□□ -1.92
COL4A5P29400 AC002553.2-201ENST00000453217 340 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.05□□□□□ -1.92
COL4A5P29400 RNU6-548P-201ENST00000517083 115 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.05□□□□□ -1.92
COL4A5P29400 AP000867.2-201ENST00000532468 320 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.05□□□□□ -1.92
COL4A5P29400 AC009101.1-201ENST00000568135 242 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 AC007423.1-201ENST00000605009 627 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
COL4A5P29400 ZNF72P-201ENST00000425869 1908 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
COL4A5P29400 MTND5P6-201ENST00000422338 1798 ntBASIC3.05□□□□□ -1.92
COL4A5P29400 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 RPL21P3-201ENST00000395517 478 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 HMGB3P23-201ENST00000414981 585 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 RPL31P12-201ENST00000422587 358 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AL034379.1-201ENST00000423216 253 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC146507.2-201ENST00000460608 476 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 OR4G11P-201ENST00000492842 939 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A5P29400 RNA5SP458-201ENST00000516188 119 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC015712.3-201ENST00000559380 164 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 MIR3605-201ENST00000583214 100 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC010928.3-201ENST00000587712 541 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC083760.1-201ENST00000589621 670 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 NTAN1P1-201ENST00000603150 646 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A5P29400 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A5P29400 AC138915.3-201ENST00000562908 1389 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A5P29400 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
COL4A5P29400 RNA5SP99-201ENST00000364020 114 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 EI24P2-201ENST00000397776 1076 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A5P29400 AL137014.1-201ENST00000420490 1226 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AL356320.1-201ENST00000429616 163 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms