Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 HMGB3P16-201ENST00000508037 287 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.76□□□□□ -1.65
POLR2AP24928 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 AP001542.2-201ENST00000593141 364 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC104662.1-201ENST00000604448 511 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC092954.2-201ENST00000609103 430 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 AP004607.9-201ENST00000618202 316 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC055839.1-201ENST00000634467 498 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 EOGT-210ENST00000615922 1931 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC011755.1-201ENST00000623763 2049 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 RNU6-181P-201ENST00000363225 107 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 RNU6-931P-201ENST00000363850 107 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 RNU4-91P-201ENST00000364778 135 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 SNORA75-201ENST00000384158 137 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 RNU6-98P-201ENST00000384173 107 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 Y_RNA.554-201ENST00000384672 102 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR2AP24928 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR2AP24928 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC098824.1-201ENST00000453565 980 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 USP9YP34-201ENST00000453983 808 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 TPT1P7-201ENST00000458300 517 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 KLF3P2-201ENST00000465138 268 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 SETP14-201ENST00000497538 873 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 RN7SKP31-201ENST00000516354 278 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR2AP24928 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC104383.1-201ENST00000530297 370 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC044913.1-201ENST00000557200 430 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 MTND1P15-201ENST00000579262 949 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AC044792.1-201ENST00000593294 196 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 BNIP3P9-201ENST00000603714 553 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AC133552.5-201ENST00000604266 540 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AP001330.5-201ENST00000607176 411 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AC055764.2-201ENST00000610089 670 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 MIR8058-201ENST00000615737 89 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 AC243312.2-201ENST00000623340 601 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
POLR2AP24928 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
POLR2AP24928 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
POLR2AP24928 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 LINC00561-201ENST00000565815 2738 ntBASIC4.75□□□□□ -1.65
POLR2AP24928 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
POLR2AP24928 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
POLR2AP24928 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 MIR133A2-201ENST00000347538 102 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 RNU4-21P-201ENST00000362802 126 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 U1.1-201ENST00000384101 164 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
POLR2AP24928 HMGB3P18-201ENST00000406327 590 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 UBTFL3-201ENST00000418934 1024 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.74□□□□□ -1.65
POLR2AP24928 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.74□□□□□ -1.65
POLR2AP24928 RPL23AP25-201ENST00000430973 463 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.74□□□□□ -1.65
POLR2AP24928 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.74□□□□□ -1.65
POLR2AP24928 HSPD1P21-201ENST00000436541 245 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 LARP1BP3-201ENST00000437229 869 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC009263.1-201ENST00000441193 1239 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 RPL23AP76-201ENST00000441860 458 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.74□□□□□ -1.65
POLR2AP24928 AC108751.2-201ENST00000469993 231 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 UBTFL6-201ENST00000477929 1024 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 UBE2CP3-201ENST00000502715 450 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC093281.2-201ENST00000510153 597 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.74□□□□□ -1.65
POLR2AP24928 PHBP17-201ENST00000528576 541 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.74□□□□□ -1.65
POLR2AP24928 OR6C7P-201ENST00000547875 934 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.74□□□□□ -1.65
POLR2AP24928 AC124947.2-202ENST00000552735 133 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AL352979.3-201ENST00000553515 247 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 ANP32BP3-201ENST00000559213 706 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AL391840.1-201ENST00000571144 367 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 AC006566.1-201ENST00000608943 513 ntBASIC4.74□□□□□ -1.65
POLR2AP24928 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms