Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CACYBPP2-201ENST00000453625 678 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 AP000893.1-201ENST00000474462 794 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 AC010486.1-201ENST00000511793 424 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 RN7SKP24-201ENST00000515888 284 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 MIR4435-1-201ENST00000582552 80 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 AC067852.4-201ENST00000590314 478 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 AC012119.1-201ENST00000603184 222 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 CTSLP2-204ENST00000629029 392 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.67□□□□□ -1.98
HMGA1P17096 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 AC007529.1-201ENST00000418574 2178 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
HMGA1P17096 AC108206.1-201ENST00000570186 4159 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGA1P17096 GSTA12P-201ENST00000402398 508 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 ATF1P1-201ENST00000406040 927 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGA1P17096 AC009302.1-201ENST00000417147 390 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 AIMP1P1-201ENST00000418670 937 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 AL034379.1-201ENST00000423216 253 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 AL049610.1-201ENST00000423374 372 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGA1P17096 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGA1P17096 RPL32P28-201ENST00000443577 397 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 MRPL50P4-201ENST00000446432 475 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGA1P17096 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGA1P17096 AP000926.1-201ENST00000479573 241 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 AC147055.1-201ENST00000509261 750 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HMGA1P17096 AC128657.1-201ENST00000549459 145 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 CKS1BP1-201ENST00000555221 240 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 U4.3-201ENST00000621047 82 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGA1P17096 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGA1P17096 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGA1P17096 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGA1P17096 AC004944.1-201ENST00000517807 3059 ntBASIC2.66□□□□□ -1.98
HMGA1P17096 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HMGA1P17096 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
HMGA1P17096 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HMGA1P17096 NCSTNP1-201ENST00000406229 144 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 PTP4A1P3-201ENST00000433661 420 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.65□□□□□ -1.99
HMGA1P17096 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGA1P17096 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.65□□□□□ -1.99
HMGA1P17096 OR4A45P-201ENST00000529954 901 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 DNAJC19P3-201ENST00000594491 331 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGA1P17096 AL049844.2-201ENST00000604280 628 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AC069234.5-201ENST00000611056 416 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AL590808.1-201ENST00000618696 141 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AP006248.2-201ENST00000623309 592 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 FRG1DP-201ENST00000635586 771 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.65□□□□□ -1.99
HMGA1P17096 AC090229.1-201ENST00000590983 1609 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGA1P17096 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGA1P17096 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGA1P17096 AC138915.3-201ENST00000562908 1389 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGA1P17096 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 RNU1-100P-201ENST00000365255 165 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 SNORA36C-201ENST00000384289 132 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 RPS4XP7-201ENST00000406274 780 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.64□□□□□ -1.99
HMGA1P17096 SDCBPP3-201ENST00000419629 891 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 OR2B8P-201ENST00000432841 938 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGA1P17096 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.64□□□□□ -1.99
HMGA1P17096 NECAP1P2-201ENST00000455668 727 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 CEACAMP4-201ENST00000457676 421 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGA1P17096 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGA1P17096 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGA1P17096 AC107871.2-201ENST00000612894 502 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 AC073348.1-201ENST00000623002 331 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGA1P17096 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGA1P17096 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGA1P17096 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGA1P17096 ZNF826P-207ENST00000622273 1910 ntBASIC2.64□□□□□ -1.99
HMGA1P17096 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGA1P17096 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HMGA1P17096 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HMGA1P17096 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGA1P17096 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGA1P17096 SNORD6-201ENST00000365444 73 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HMGA1P17096 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HMGA1P17096 RNU6-328P-201ENST00000390887 106 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 RNA5SP344-201ENST00000411081 104 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 RNA5SP508-201ENST00000411327 119 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms