Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 UBE2V1P15-201ENST00000407776 448 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC069218.2-201ENST00000411665 344 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 RPL26P37-201ENST00000411983 438 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 AL139132.1-201ENST00000431587 344 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 HMGB1P5-202ENST00000451497 985 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 RPL27AP5-201ENST00000469428 449 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 RNA5SP341-201ENST00000516261 117 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 RNU6-1308P-201ENST00000516817 103 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 HIGD1AP10-201ENST00000527837 282 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AP003168.1-201ENST00000530091 307 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 MIR3944-201ENST00000581277 108 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 MTCO3P22-201ENST00000603219 784 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AP004372.1-201ENST00000604842 844 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC242628.1-201ENST00000606810 391 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC011816.2-201ENST00000607089 556 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 AC135803.1-201ENST00000608748 565 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 MIR7973-1-201ENST00000614683 76 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 PLCE1P1-201ENST00000622094 305 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDNEP1O95476 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CTDNEP1O95476 ASNSP3-201ENST00000451989 1306 ntBASIC3.34□□□□□ -1.87
CTDNEP1O95476 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.34□□□□□ -1.88
CTDNEP1O95476 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CTDNEP1O95476 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.88
CTDNEP1O95476 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 AIMP1P1-201ENST00000418670 937 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 NDUFA5P10-201ENST00000432147 357 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AC104978.1-201ENST00000449387 391 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 RPS20P32-201ENST00000456044 356 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 RPL30P11-201ENST00000495304 339 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 MTATP6P22-201ENST00000507369 598 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 POU5F1P7-201ENST00000508759 541 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AC010374.2-201ENST00000512933 535 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 HMGB1P46-201ENST00000520062 610 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AP001207.1-201ENST00000524051 481 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 CKS1BP1-201ENST00000555221 240 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 AP003117.1-201ENST00000602771 554 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 LLPHP1-201ENST00000603571 367 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 IGHV3-29-201ENST00000604817 344 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 XIST_intron.1-201ENST00000619444 68 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 AC015726.3-201ENST00000624501 418 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
CTDNEP1O95476 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTDNEP1O95476 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
CTDNEP1O95476 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTDNEP1O95476 SNORA9.2-201ENST00000365361 133 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 RNU6-317P-201ENST00000384031 107 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 RNU6-244P-201ENST00000391028 104 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 LINC01881-201ENST00000416103 412 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 MTND4P24-201ENST00000424002 397 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AL031736.2-201ENST00000426573 787 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 MTATP6P11-201ENST00000428071 670 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 RPS7P5-201ENST00000441482 581 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 RPL21P18-201ENST00000469899 480 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 RPL21P103-201ENST00000479921 488 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC126121.1-201ENST00000482313 553 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 COL6A4P2-205ENST00000509855 506 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AP000857.1-201ENST00000532151 543 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 NOP56P3-201ENST00000549457 385 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC023158.1-201ENST00000561632 1025 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms