Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 DNM1P47-203ENST00000571780 12667 ntBASIC6.77□□□□□ -1.32
ACTN4O43707 ZNF33CP-201ENST00000432492 2030 ntBASIC6.77□□□□□ -1.32
ACTN4O43707 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
ACTN4O43707 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 RN7SKP95-201ENST00000362860 303 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RNU6-1059P-201ENST00000363752 98 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RNU6-188P-201ENST00000364207 107 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 Y_RNA.274-201ENST00000364714 101 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 RNU6-125P-201ENST00000384505 107 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 MIR551B-201ENST00000384984 96 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 MIR188-201ENST00000385034 86 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC097374.1-203ENST00000400783 485 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RNU2-14P-201ENST00000411053 191 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AL035422.1-201ENST00000414193 397 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 NME1P1-201ENST00000420914 382 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC022022.1-201ENST00000430304 178 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC073410.1-201ENST00000435125 589 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC097359.1-201ENST00000447946 463 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 ACA64.4-201ENST00000459070 127 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 ATP5LP5-201ENST00000483050 299 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RPL12P30-201ENST00000488389 499 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 CEACAMP10-202ENST00000495431 496 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC097486.1-201ENST00000515331 210 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RNU5B-3P-201ENST00000516601 115 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 RNU6-323P-201ENST00000521915 107 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 AP001922.4-201ENST00000526967 290 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.77□□□□□ -1.33
ACTN4O43707 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.77□□□□□ -1.33
ACTN4O43707 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.77□□□□□ -1.33
ACTN4O43707 AC026371.1-201ENST00000551867 419 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ACTN4O43707 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.77□□□□□ -1.33
ACTN4O43707 HMGN2P28-201ENST00000606102 262 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AC015819.1-201ENST00000613588 663 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 AP000432.2-201ENST00000624164 2048 ntBASIC6.77□□□□□ -1.33
ACTN4O43707 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ACTN4O43707 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
ACTN4O43707 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ACTN4O43707 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.76□□□□□ -1.33
ACTN4O43707 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ACTN4O43707 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ACTN4O43707 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ACTN4O43707 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 AC009313.2-201ENST00000417893 1941 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
ACTN4O43707 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 SNORA21-201ENST00000362423 132 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.76□□□□□ -1.33
ACTN4O43707 RNU6-48P-201ENST00000384161 107 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 RNA5SP156-201ENST00000410250 110 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.76□□□□□ -1.33
ACTN4O43707 RPLP0P7-201ENST00000416050 667 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 AC097713.2-201ENST00000430199 356 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 RPL12P16-201ENST00000431098 498 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.76□□□□□ -1.33
ACTN4O43707 AL138752.1-201ENST00000452964 351 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 RNU7-59P-201ENST00000459101 61 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 RN7SL552P-201ENST00000462094 276 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.76□□□□□ -1.33
ACTN4O43707 AC096745.1-201ENST00000509945 370 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.76□□□□□ -1.33
ACTN4O43707 AC007991.1-201ENST00000522680 631 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms