Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.96□□□□□ -1.62
PRPF3O43395 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC090615.1-201ENST00000577519 154 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF3O43395 AL353997.4-201ENST00000586196 166 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 MIR7154-201ENST00000620673 73 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AC011944.2-201ENST00000624440 683 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 CR381572.1-201ENST00000625098 102 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF3O43395 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 RNU1-14P-201ENST00000362759 152 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RNU6-501P-201ENST00000364072 100 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RNU6-374P-201ENST00000364146 108 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RNU6-761P-201ENST00000384148 107 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 DHFRP6-201ENST00000401776 268 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC011933.1-201ENST00000413334 321 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 HMGB1P11-201ENST00000413899 637 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF3O43395 RPS12P5-201ENST00000423449 371 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 CKS1BP5-201ENST00000434172 273 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RPS3AP54-201ENST00000435535 734 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC129850.1-201ENST00000436203 508 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 SDCBPP1-201ENST00000440192 890 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 MTND2P4-201ENST00000445034 1004 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 HMGB1P15-201ENST00000453854 435 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 AC116533.1-201ENST00000459748 321 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RN7SL303P-201ENST00000469773 251 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 SETP11-201ENST00000473027 690 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC109486.1-201ENST00000486833 374 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 RPL35P6-201ENST00000490024 372 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 RNA5SP49-201ENST00000516450 115 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC135279.1-201ENST00000543493 504 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 PSMB7P1-201ENST00000556349 514 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 ACTR3BP3-201ENST00000565577 979 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC012435.1-202ENST00000568772 240 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 WISP1-OT1-201ENST00000602893 642 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 BBIP1P1-201ENST00000602999 279 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF3O43395 AL356596.1-201ENST00000624230 379 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC007494.3-201ENST00000624660 743 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PRPF3O43395 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PRPF3O43395 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF3O43395 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.95□□□□□ -1.62
PRPF3O43395 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PRPF3O43395 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PRPF3O43395 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF3O43395 CR381670.1-201ENST00000624291 1693 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF3O43395 RNU6-28P-201ENST00000362378 107 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 RPS3AP26-201ENST00000398259 784 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 LAP3P1-201ENST00000403648 294 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 RNA5SP36-201ENST00000410197 133 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 RNA5SP56-201ENST00000410277 118 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 RNU4-25P-201ENST00000410569 230 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC016397.1-201ENST00000412463 242 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AL161631.1-201ENST00000417933 486 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 EIF4EP1-201ENST00000422311 642 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF3O43395 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 AC244035.1-201ENST00000430042 390 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.94□□□□□ -1.62
PRPF3O43395 AC118469.1-201ENST00000442943 488 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 EEF1E1P1-201ENST00000446998 430 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 MTCO1P27-201ENST00000448269 226 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 RPS27AP8-201ENST00000452665 445 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 ARPC3P2-201ENST00000457786 533 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC116337.2-201ENST00000477662 156 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC093267.1-201ENST00000489176 961 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC082651.2-201ENST00000496833 166 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC108145.1-201ENST00000503770 153 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 BNIP3P41-201ENST00000503774 571 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 AL592156.1-201ENST00000508758 304 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.94□□□□□ -1.62
PRPF3O43395 MTCO3P44-201ENST00000510977 541 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC008958.1-201ENST00000511047 682 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms