Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CYCSP46-201ENST00000423569 204 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 EIF1P3-201ENST00000423841 334 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 OR4C10P-201ENST00000434991 931 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 RPL23AP74-201ENST00000437246 471 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 MTCO2P7-201ENST00000446518 666 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 MTCO1P27-201ENST00000448269 226 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 ARPC3P5-201ENST00000448802 534 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 PLGLA-201ENST00000465668 449 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC093767.1-201ENST00000504523 156 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 Y_RNA.695-201ENST00000516715 107 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 OR6C7P-201ENST00000547875 934 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC103987.3-201ENST00000582071 292 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC119751.7-201ENST00000600494 245 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC073544.2-201ENST00000601155 540 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 U73023.1-201ENST00000603134 700 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC064872.1-201ENST00000604823 1072 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 RN7SKP299-201ENST00000606679 301 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC112484.5-201ENST00000624189 228 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 EOGT-210ENST00000615922 1931 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 GDI2P1-201ENST00000429312 1336 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RPL23AP57-201ENST00000332361 466 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP317-201ENST00000410176 116 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RN7SKP235-201ENST00000410662 305 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP311-201ENST00000411290 116 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AL157831.1-201ENST00000426134 473 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AL365184.2-201ENST00000431139 435 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 MTND5P14-201ENST00000441481 1267 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RPL7P31-201ENST00000450192 724 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RPL31P50-201ENST00000471002 296 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC022034.3-201ENST00000471393 478 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RPS4XP18-201ENST00000495480 763 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC010424.1-201ENST00000506336 297 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC093824.1-201ENST00000508796 343 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC091965.2-201ENST00000512324 613 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 Y_RNA.655-201ENST00000515919 96 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP315-201ENST00000516340 116 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP312-201ENST00000517068 116 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RPL21P7-201ENST00000557463 483 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 PCMTD1P2-201ENST00000565017 355 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RSL24D1P11-201ENST00000591045 491 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC146944.4-201ENST00000602697 718 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC007566.2-201ENST00000603642 413 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AC025588.3-201ENST00000604182 274 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 PABPC1P9-201ENST00000426076 1612 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms