Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL355578.1-201ENST00000607405 1328 ntBASIC2.41□□□□□ -2.02
TCRBV4S1A1TA0A5B7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.41□□□□□ -2.02
TCRBV4S1A1TA0A5B7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.41□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
TCRBV4S1A1TA0A5B7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 SNORD67-201ENST00000390833 111 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 HMGB1P10-201ENST00000395823 563 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 MIR887-201ENST00000401258 79 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL031121.1-201ENST00000406553 254 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC004987.3-201ENST00000413879 771 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPL31P45-201ENST00000419532 356 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 ELOCP6-201ENST00000429066 328 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 YWHAZP7-201ENST00000436906 631 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 CBX1P4-201ENST00000439415 457 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 ELOCP12-201ENST00000458706 328 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 SNORA59A-201ENST00000459326 152 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPL37P6-202ENST00000464216 403 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPL5P23-201ENST00000496040 868 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC080014.1-201ENST00000496877 1201 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 ATG10-AS1-201ENST00000504846 648 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RNU4-18P-201ENST00000516751 149 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC090136.1-201ENST00000520009 240 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC008083.2-201ENST00000546707 476 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 EIF4BP1-201ENST00000554881 351 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC005951.1-201ENST00000576706 485 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 FAM60CP-201ENST00000591086 664 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC016877.3-201ENST00000606778 504 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC004832.5-201ENST00000608677 401 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 MIR7106-201ENST00000612419 65 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 FAM35CP-201ENST00000554755 2470 ntBASIC2.4□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC010733.2-201ENST00000589496 5702 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 SNORA44-201ENST00000384584 132 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RN7SKP220-201ENST00000410611 288 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPS7P5-201ENST00000441482 581 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC025750.2-201ENST00000442609 450 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPL7P59-201ENST00000447700 943 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RPL31P53-201ENST00000457065 348 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL137843.1-201ENST00000605078 385 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC055764.2-201ENST00000610089 670 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC100793.4-201ENST00000613683 429 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC073348.1-201ENST00000623002 331 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LRRC77P-213ENST00000637727 880 ntBASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV4S1A1TA0A5B7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AP000567.1-201ENST00000406413 156 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AL390023.1-201ENST00000428836 262 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 MTND4LP22-201ENST00000508209 276 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LLPHP1-201ENST00000603571 367 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC091488.1-201ENST00000604239 660 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 IGHV3-29-201ENST00000604817 344 ntBASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV4S1A1TA0A5B7 AC105429.2-201ENST00000610567 517 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms