Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 ELL2P4-201ENST00000446870 1376 ntBASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 LINC01109-201ENST00000603837 3081 ntBASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
CCDC187A0A096LP49 SAGE4P-201ENST00000442271 3381 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC004520.1-201ENST00000608362 1413 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RNU6-1226P-201ENST00000384317 107 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RNY3P10-201ENST00000384764 102 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 EIF5P1-201ENST00000400019 1231 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL121972.1-201ENST00000402023 252 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 SSXP10-201ENST00000402595 565 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 HMGB1P11-201ENST00000413899 637 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RPL7P30-201ENST00000420888 709 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC004448.2-201ENST00000422360 586 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC104333.2-201ENST00000422630 192 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL365184.2-201ENST00000431139 435 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 COX6CP12-201ENST00000446748 202 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 NUTF2P3-201ENST00000448540 384 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ARPC3P5-201ENST00000448802 534 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 EPS15P1-201ENST00000448836 336 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RNA5SP269-201ENST00000459032 137 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RPL7P22-201ENST00000466005 733 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 CBX3P3-201ENST00000508108 532 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 SNORA31.9-201ENST00000516429 84 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC104986.1-201ENST00000517978 436 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC105031.1-201ENST00000518550 476 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 RPL23AP53-201ENST00000521854 457 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 PTP4A1P6-201ENST00000531034 478 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 OR6C7P-201ENST00000547875 934 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 MTCO3P24-201ENST00000572729 782 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 MIR3611-201ENST00000584484 83 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC113194.1-201ENST00000606037 500 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL159169.3-201ENST00000608871 561 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ZYXP1-201ENST00000617638 118 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 BX005214.3-202ENST00000619809 325 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AC015871.5-202ENST00000623252 701 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 FAM157B-203ENST00000639350 358 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 AL672167.1-204ENST00000641875 3017 ntBASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC187A0A096LP49 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 CR848007.1-201ENST00000442354 1699 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AP002907.1-201ENST00000606361 1430 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 ARF4P3-201ENST00000397387 509 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AC004987.3-201ENST00000413879 771 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 RPS15AP40-201ENST00000419621 391 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AL389915.1-201ENST00000422463 466 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 UBE2V1P3-201ENST00000439651 417 ntBASIC4.38□□□□□ -1.71
CCDC187A0A096LP49 AC092641.1-201ENST00000440229 772 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms