Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC015726.1-201ENST00000602353 681 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC114878.2-201ENST00000604863 1251 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC092354.2-201ENST00000607786 514 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR7702-201ENST00000621931 59 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AL357559.1-201ENST00000622228 274 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 ZNF663P-202ENST00000641770 1131 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU4-51P-201ENST00000364206 140 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-339P-201ENST00000384310 107 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR217-201ENST00000384817 110 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 MTND4LP20-201ENST00000402379 270 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL133264.1-201ENST00000407157 562 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU2-71P-201ENST00000411395 189 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 SYF2P2-201ENST00000417620 583 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 Z97055.1-201ENST00000419730 712 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL391219.1-201ENST00000422570 483 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL513174.1-201ENST00000423182 629 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RAD23BP3-201ENST00000454157 1152 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL133477.1-201ENST00000457472 514 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL23AP62-201ENST00000463396 453 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC078785.3-201ENST00000476607 425 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 HMGN1P11-201ENST00000508668 303 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU7-143P-201ENST00000516781 65 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 RNA5SP179-201ENST00000517284 121 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AP004371.1-201ENST00000525240 214 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AP001317.1-201ENST00000531194 960 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC092851.1-201ENST00000535964 478 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 YPEL5P3-201ENST00000547227 352 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC245884.10-201ENST00000597355 337 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL445435.1-201ENST00000604232 665 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL365400.2-201ENST00000605604 902 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC009237.15-201ENST00000610252 501 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC073968.1-201ENST00000618594 637 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AC022960.3-201ENST00000619794 441 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 AL157770.1-201ENST00000623049 439 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 MFSD8-245ENST00000641743 948 ntBASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA1Q9Y5H4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 AC032011.1-201ENST00000611703 1549 ntBASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGA1Q9Y5H4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 RNU6-492P-201ENST00000363035 104 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 FCF1P2-201ENST00000415284 583 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 MTCO3P12-201ENST00000416718 547 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AL449283.1-202ENST00000418249 604 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 Z93242.1-201ENST00000427102 353 ntBASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA1Q9Y5H4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms