Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 NUP58P1-201ENST00000502546 1738 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 HMGB1P5-201ENST00000255320 642 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 RNU5B-1-201ENST00000363286 116 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 RPL32P23-201ENST00000397237 405 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 MIR1193-201ENST00000408109 78 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 RN7SKP156-201ENST00000410308 342 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 RNU4-78P-201ENST00000410940 126 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 FCF1P2-201ENST00000415284 583 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 OR1AA1P-201ENST00000419597 916 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 SDCBPP2-201ENST00000424643 885 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 MOB1AP1-201ENST00000430903 535 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 NANOGP10-201ENST00000453325 895 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 snoU13.4-201ENST00000458916 104 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 PABPC1P3-201ENST00000469174 459 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 NPM1P41-201ENST00000512920 831 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AP003355.1-201ENST00000518956 587 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC087894.1-201ENST00000538359 518 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC084824.1-201ENST00000550917 1005 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 HSPE1P5-201ENST00000561489 272 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 OR6C71P-202ENST00000641886 1107 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC024560.2-201ENST00000507981 1497 ntBASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA9Q9UGM1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RNA5SP479-201ENST00000364858 117 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 SNORA51.6-201ENST00000384151 125 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AL391417.1-201ENST00000404100 426 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RPL23AP47-201ENST00000408017 460 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 SNORA57.3-201ENST00000411095 141 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-575P-201ENST00000411326 105 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC009237.5-201ENST00000414271 501 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RPL21P32-201ENST00000419877 477 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 TCEA1P2-201ENST00000420496 906 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RPL31P54-201ENST00000429803 370 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 ARF4P4-201ENST00000439608 520 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 MTCO1P48-201ENST00000448024 1096 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 SLC31A1P1-201ENST00000451221 567 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC109471.1-201ENST00000511631 612 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC093853.1-201ENST00000515689 483 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC107982.3-201ENST00000584957 985 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AP001029.3-201ENST00000588063 596 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 AC006254.3-201ENST00000603353 884 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 PLCE1P1-201ENST00000622094 305 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms