Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 OR11H5P-202ENST00000641612 1325 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 MIR1289-2-201ENST00000408360 111 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 FCF1P1-201ENST00000432690 571 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC104058.1-201ENST00000448028 297 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC118282.1-201ENST00000506408 765 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC119751.1-201ENST00000513357 765 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AL355836.1-201ENST00000555951 870 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AL109741.3-201ENST00000561748 592 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC092608.2-201ENST00000624427 218 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 AC079228.1-201ENST00000624774 1049 ntBASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.56□□□□□ -1.84
PHRF1Q9P1Y6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 RPL21P41-201ENST00000459863 264 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AP004217.1-201ENST00000480579 346 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 KLHL2P1-201ENST00000508691 521 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC005921.1-201ENST00000510589 286 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AF186190.1-201ENST00000517470 480 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC025754.2-201ENST00000606491 432 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC025034.2-201ENST00000623264 286 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AL451074.5-201ENST00000415894 435 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 DYNLL1P6-201ENST00000503440 264 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 ZNF861P-201ENST00000588126 639 ntBASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.55□□□□□ -1.84
PHRF1Q9P1Y6 AC004972.1-201ENST00000623934 2209 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 FAM133CP-201ENST00000332869 704 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 BTF3P7-201ENST00000407097 488 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 SNORA9.3-201ENST00000516383 129 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AL391156.1-201ENST00000554965 554 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AC009159.1-201ENST00000618386 642 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 CR381653.2-201ENST00000624041 768 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AP000526.1-201ENST00000603308 1388 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AC134882.1-201ENST00000603738 1676 ntBASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHRF1Q9P1Y6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 RNA5SP425-201ENST00000410336 112 ntBASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 UBE2D3P1-201ENST00000436669 444 ntBASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 RN7SKP244-201ENST00000516513 307 ntBASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 AL442163.2-201ENST00000553912 710 ntBASIC3.53□□□□□ -1.84
PHRF1Q9P1Y6 AL139415.2-201ENST00000431968 163 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AP003102.1-201ENST00000525638 661 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AP002770.2-201ENST00000543613 532 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AC009977.1-201ENST00000586015 570 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AL392112.1-201ENST00000605115 829 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AC109315.1-201ENST00000584143 1347 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 RPS3AP26-201ENST00000398259 784 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AC004987.3-201ENST00000413879 771 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 RPL23AP15-201ENST00000450202 459 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 OR6K1P-201ENST00000456766 971 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 AC078785.3-201ENST00000476607 425 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms