Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC010735.1-201ENST00000567305 1026 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 MIR4504-201ENST00000577413 92 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AL136370.1-201ENST00000608166 691 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC016542.1-201ENST00000608259 493 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 AC103798.2-201ENST00000624292 632 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.79□□□□□ -1.8
HPS4Q9NQG7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HPS4Q9NQG7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 SGO1P1-201ENST00000603525 1447 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC006504.1-201ENST00000562493 3666 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 MTND5P28-201ENST00000438005 1594 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RNU5B-4P-201ENST00000363508 111 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RNU6-549P-201ENST00000384433 107 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RPS7P15-201ENST00000415804 584 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC245054.1-201ENST00000420944 258 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC097713.2-201ENST00000430199 356 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RPL21P112-201ENST00000434403 463 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL592437.1-201ENST00000443781 492 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 Z77249.1-201ENST00000444622 1175 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RPL21P104-201ENST00000464143 478 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RPS4XP10-201ENST00000465034 731 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC004069.2-201ENST00000505438 1114 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC119751.1-201ENST00000513357 765 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC016065.2-201ENST00000514530 444 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC104115.2-201ENST00000523026 687 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 MTND5P21-201ENST00000531961 522 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC087894.1-201ENST00000538359 518 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL133457.1-201ENST00000564251 987 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 MTCYBP28-201ENST00000566728 1132 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC104072.1-201ENST00000568817 668 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC090666.1-201ENST00000578241 445 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL031985.2-201ENST00000600955 480 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC005156.1-201ENST00000613371 573 ntBASIC3.78□□□□□ -1.8
HPS4Q9NQG7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HPS4Q9NQG7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HPS4Q9NQG7 AL365440.1-201ENST00000436135 2167 ntBASIC3.78□□□□□ -1.81
HPS4Q9NQG7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 SNORA51.2-201ENST00000364595 132 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 RNA5SP267-201ENST00000364893 126 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 OR1L1-202ENST00000373686 1083 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 MIR16-1-201ENST00000385271 89 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AP000567.1-201ENST00000406413 156 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AL024507.1-201ENST00000412741 274 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AC091390.3-201ENST00000426478 338 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AC012497.1-201ENST00000429392 575 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 HMGB1P12-201ENST00000438594 598 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AL645931.1-201ENST00000439737 410 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 RPL23AP33-201ENST00000442301 452 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 MTCO3P16-201ENST00000454456 754 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 snoU13.24-201ENST00000458998 104 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AC026427.2-201ENST00000506228 536 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
HPS4Q9NQG7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.77□□□□□ -1.81
HPS4Q9NQG7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms