Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MIR4504-201ENST00000577413 92 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 NF1P5-201ENST00000588287 448 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC010424.2-201ENST00000607594 443 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC019226.1-201ENST00000625666 515 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 MIR7641-1-201ENST00000627518 61 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC097504.1-201ENST00000515103 2415 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AP002001.2-201ENST00000529025 1469 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AL445487.1-201ENST00000415694 1580 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
AMBRA1Q9C0C7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
AMBRA1Q9C0C7 AP000542.2-201ENST00000623199 6179 ntBASIC4.46□□□□□ -1.69
AMBRA1Q9C0C7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
AMBRA1Q9C0C7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC104118.1-201ENST00000607625 1589 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 SNORD115.1-201ENST00000391109 76 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 CYB5AP4-201ENST00000396692 399 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 ARL4AP5-201ENST00000404372 599 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC245052.5-201ENST00000416320 649 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC009302.1-201ENST00000417147 390 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 RAD23BP1-201ENST00000421404 1227 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AL360081.1-201ENST00000428299 555 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 NEK4P1-201ENST00000433383 879 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AL451139.1-201ENST00000434718 346 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 RPS3AP54-201ENST00000435535 734 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 PSMD10P3-201ENST00000437000 448 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 RPL7P11-201ENST00000437586 658 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC099563.1-201ENST00000456086 418 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AP000942.1-201ENST00000463969 747 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC146507.1-201ENST00000468335 354 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 RPL31P58-201ENST00000469001 379 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AL121769.1-201ENST00000469473 401 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 PRDX4P1-201ENST00000507189 574 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 COX6CP8-201ENST00000522620 226 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC022861.1-201ENST00000522981 663 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC090312.1-201ENST00000580637 348 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC209154.1-201ENST00000582156 337 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 MIR4691-201ENST00000583764 85 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC090948.2-201ENST00000607363 564 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AC009237.17-201ENST00000618111 748 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 AL157786.1-207ENST00000627771 695 ntBASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AMBRA1Q9C0C7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 FARSBP1-201ENST00000435808 1778 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC092435.4-201ENST00000623012 4159 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 Y_RNA.296-201ENST00000364930 108 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RNA5SP455-201ENST00000365190 119 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RNU4-12P-201ENST00000365233 139 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 SNORA62-201ENST00000365493 153 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 SNORD115-47-201ENST00000391226 86 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL031679.1-201ENST00000400616 525 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL080315.1-201ENST00000406055 466 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 MTCO1P17-201ENST00000411522 491 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms