Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.674-201ENST00000516362 113 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 SNORA40.15-201ENST00000516884 107 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC109329.1-201ENST00000518744 317 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 DEFB109D-201ENST00000529497 240 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AP006289.1-201ENST00000538089 277 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC092490.3-201ENST00000545370 572 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 SULT1C2P1-202ENST00000562418 459 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC141002.1-201ENST00000607025 279 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AL138825.1-201ENST00000618587 192 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC010329.1-201ENST00000593903 8328 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 AL139384.2-201ENST00000613809 3590 ntBASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 DDX18P3-201ENST00000404856 2007 ntBASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.96□□□□□ -1.45
COL25A1Q9BXS0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 SNORA37-201ENST00000384504 129 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 SNORA41-201ENST00000384675 132 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 RPL12P34-201ENST00000424532 479 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 SNORD5.1-201ENST00000458800 75 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 RNU7-120P-201ENST00000459334 63 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC055855.1-201ENST00000489563 579 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC009120.1-201ENST00000493458 473 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 RNU6-189P-201ENST00000516120 101 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AP003733.2-201ENST00000529409 171 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 SUB1P3-201ENST00000564581 315 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 MIR4260-201ENST00000583107 67 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC010463.3-201ENST00000594077 500 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AL512782.1-201ENST00000603093 364 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC000068.2-201ENST00000608816 460 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AP001486.3-201ENST00000615334 372 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC011155.2-201ENST00000623202 216 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 U6.101-201ENST00000637707 76 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 AC108751.5-201ENST00000492880 1336 ntBASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.96□□□□□ -1.46
COL25A1Q9BXS0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 AC006600.2-201ENST00000624834 2506 ntBASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.95□□□□□ -1.46
COL25A1Q9BXS0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms