Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HMGB1P13-201ENST00000406019 642 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AL583834.1-201ENST00000406943 343 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AL353692.2-201ENST00000407054 335 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 RPL23AP69-201ENST00000431134 458 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC107083.1-201ENST00000439643 279 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC096576.1-201ENST00000489014 359 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 RPL30P11-201ENST00000495304 339 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC114967.1-201ENST00000504890 259 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AL121603.1-201ENST00000553815 142 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC012467.1-201ENST00000607740 256 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 AC099778.2-201ENST00000610904 211 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 U6.48-201ENST00000618523 106 ntBASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.88□□□□□ -1.79
RPAP1Q9BWH6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC092326.2-201ENST00000624772 1561 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 ZNF90P1-201ENST00000480493 1951 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 SNORA80A-201ENST00000363922 136 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 SNORA44-201ENST00000384584 132 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 TAF9BP2-201ENST00000400856 499 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AL138885.1-201ENST00000405921 675 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 XKRYP4-201ENST00000414395 483 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 RSL24D1P8-201ENST00000434442 492 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 CST9LP2-201ENST00000437612 320 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 TPTE2P6-202ENST00000445572 1007 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 XKRYP5-201ENST00000449659 483 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC078785.3-201ENST00000476607 425 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC104687.1-201ENST00000485829 412 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AL035404.1-201ENST00000497982 568 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AP001207.2-201ENST00000519490 539 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC022790.1-201ENST00000522872 204 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC083899.3-201ENST00000603413 594 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC105227.2-201ENST00000615075 605 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AC090617.9-201ENST00000623751 147 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPAP1Q9BWH6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 ZNF807-201ENST00000328088 1707 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 RNA5SP383-201ENST00000362934 120 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 RNU6-98P-201ENST00000384173 107 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AL356057.1-202ENST00000402263 756 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 HMGB3P23-201ENST00000414981 585 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 LINC01347-201ENST00000417964 355 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC006960.1-201ENST00000419980 153 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AL691517.1-201ENST00000440833 1235 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AL162713.1-201ENST00000604480 262 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC004775.1-201ENST00000607389 753 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 AC003001.2-201ENST00000616294 831 ntBASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPAP1Q9BWH6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 MIR148B-201ENST00000362252 99 ntBASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 AC007899.1-201ENST00000412776 775 ntBASIC3.85□□□□□ -1.79
RPAP1Q9BWH6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms