Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC004062.1-201ENST00000509926 645 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 FCF1P8-201ENST00000510322 597 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 RNU6-889P-201ENST00000517189 103 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL442163.2-201ENST00000553912 710 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC103881.1-201ENST00000603476 538 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC008962.1-201ENST00000605729 304 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL161637.1-201ENST00000622380 412 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 CR392039.5-201ENST00000623201 510 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC243312.2-201ENST00000623340 601 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AP002907.1-201ENST00000606361 1430 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AL512646.1-201ENST00000269395 1077 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SNORA62.3-201ENST00000365110 153 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SKINT1L-201ENST00000401057 817 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 Z86062.1-201ENST00000406773 777 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SNORA11-201ENST00000408789 128 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 ISCA1P2-201ENST00000438679 421 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 CDC27P1-201ENST00000445384 715 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 RPL21P23-201ENST00000446654 460 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 snoU13.4-201ENST00000458916 104 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 HMGB1P25-201ENST00000468402 607 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC133963.2-201ENST00000513686 578 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC009948.4-201ENST00000604692 675 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AL109618.2-201ENST00000605527 211 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC039056.2-201ENST00000622261 511 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AL356863.1-201ENST00000623378 1080 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 LINC00216-201ENST00000623548 1126 ntBASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CLHC1Q8NHS4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CLHC1Q8NHS4 AC107081.3-201ENST00000612715 2034 ntBASIC3.15□□□□□ -1.9
CLHC1Q8NHS4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.9
CLHC1Q8NHS4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLHC1Q8NHS4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 MIR218-2-201ENST00000385006 110 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 MT-TC-201ENST00000387405 66 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 DSTNP4-201ENST00000399472 474 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC018644.1-201ENST00000429934 551 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC007389.2-201ENST00000434630 306 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC122718.1-201ENST00000439448 744 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RPL23AP15-201ENST00000450202 459 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 FAM133DP-201ENST00000464802 691 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RN7SL542P-201ENST00000467147 294 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC104472.2-201ENST00000469035 601 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RPL7P38-201ENST00000488396 739 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RNF138P1-201ENST00000502765 546 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms