Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 GMPSP1-201ENST00000514075 579 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 RN7SKP57-201ENST00000517248 293 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 SYF2P1-201ENST00000550658 413 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 AC015849.2-201ENST00000605738 409 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 Z99129.2-201ENST00000619967 314 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 AL355578.1-201ENST00000607405 1328 ntBASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC112Q8NEF3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AL451074.5-201ENST00000415894 435 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 HSFY4P-201ENST00000415994 1181 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC005326.1-201ENST00000429197 123 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 TPMTP4-201ENST00000450749 678 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 RPL26P28-201ENST00000451325 435 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 PRDX3P4-201ENST00000470828 747 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 RPS17P11-201ENST00000474297 293 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 RPL23AP11-201ENST00000475260 469 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AL157394.1-201ENST00000562983 1224 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 AC018754.1-201ENST00000607486 925 ntBASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC112Q8NEF3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 RNU6-356P-201ENST00000384140 107 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AL590004.2-201ENST00000404787 371 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 RNU2-6P-201ENST00000411404 190 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC096664.2-201ENST00000411843 406 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 SAR1AP4-201ENST00000429225 591 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 RPS27AP9-201ENST00000477681 438 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC110794.1-201ENST00000505816 425 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 CCNHP1-201ENST00000513311 678 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 RN7SKP244-201ENST00000516513 307 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AP001207.1-201ENST00000524051 481 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 OR5G4P-201ENST00000525251 760 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 FAM60CP-201ENST00000591086 664 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 VN1R92P-201ENST00000598511 928 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC091488.1-201ENST00000604239 660 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC005000.2-201ENST00000605468 310 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 AC009464.1-201ENST00000615731 469 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 ASNSP3-201ENST00000451989 1306 ntBASIC3.34□□□□□ -1.87
CCDC112Q8NEF3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC112Q8NEF3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 RPL5P18-201ENST00000406671 891 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 VDAC1P3-201ENST00000434069 851 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 HMGB1P45-201ENST00000435986 653 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC008155.2-201ENST00000464337 397 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 RPS29P2-201ENST00000479278 136 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC021678.1-201ENST00000505195 936 ntBASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC112Q8NEF3 AC034268.2-201ENST00000571784 482 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms