Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 TTC41P-205ENST00000551270 3963 ntBASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 ASNSP1-204ENST00000641977 1664 ntBASIC5.12□□□□□ -1.59
TMEFF1Q8IYR6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC090017.1-201ENST00000548612 1779 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-223P-201ENST00000362830 107 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-1120P-201ENST00000362988 108 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-525P-201ENST00000363685 104 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RN7SKP113-201ENST00000363891 295 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-456P-201ENST00000384493 107 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 Y_RNA.579-201ENST00000390939 94 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC068050.1-201ENST00000394891 380 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RPL23AP32-201ENST00000395315 459 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 MRPL42P2-201ENST00000403169 426 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 PPIAP9-201ENST00000403866 498 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RNU2-62P-201ENST00000410868 191 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC009161.1-201ENST00000417306 376 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AL451062.2-201ENST00000427515 271 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RPS24P8-201ENST00000431490 402 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC099670.2-201ENST00000435130 321 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC016691.1-201ENST00000441321 413 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 Y_RNA.639-201ENST00000458981 102 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RN7SL319P-201ENST00000480656 221 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC021146.2-201ENST00000504736 556 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC091912.1-201ENST00000511351 248 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC112206.3-201ENST00000514578 389 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 SNORA40.12-201ENST00000516329 111 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 Y_RNA.691-201ENST00000516611 103 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC107953.1-201ENST00000522216 297 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC090751.1-201ENST00000566966 267 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC008814.1-201ENST00000603797 406 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC233309.1-201ENST00000619522 751 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 AC009161.2-201ENST00000624626 138 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 ERCC6-202ENST00000374127 1782 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.11□□□□□ -1.59
TMEFF1Q8IYR6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 AC022893.2-201ENST00000564832 3296 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 AC092681.1-201ENST00000297369 291 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 AC079741.1-201ENST00000321498 212 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 AC126755.2-208ENST00000327792 462 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 AC138969.1-213ENST00000331436 462 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 RPL32P3-201ENST00000359025 275 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 Y_RNA.184-201ENST00000363884 108 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-317P-201ENST00000384031 107 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 SNORA32.2-201ENST00000384049 122 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-43P-201ENST00000384302 107 ntBASIC5.1□□□□□ -1.59
TMEFF1Q8IYR6 RNU6-1158P-201ENST00000391167 107 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms