Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 OR6K3-202ENST00000368146 996 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 USP9YP19-201ENST00000412165 485 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC004987.3-201ENST00000413879 771 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL159987.2-201ENST00000432754 307 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC006994.1-201ENST00000438212 839 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 ISCA1P2-201ENST00000438679 421 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 HSPE1P28-201ENST00000443139 211 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 FTH1P2-201ENST00000466086 412 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC126121.1-201ENST00000482313 553 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC073522.1-201ENST00000483312 377 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC010468.3-201ENST00000508225 458 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 RN7SKP234-201ENST00000517173 224 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 NCAPGP2-201ENST00000557911 754 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC104229.1-201ENST00000561364 255 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC106734.1-201ENST00000568646 663 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC008507.1-201ENST00000587506 734 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AC073592.7-201ENST00000623659 507 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC65Q8IXS2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP119-201ENST00000362715 117 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 RNU6-1293P-201ENST00000384077 107 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 HMGN1P24-201ENST00000412282 298 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 EI24P1-201ENST00000416584 867 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 RPL23AP69-201ENST00000431134 458 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 MRPL35P4-201ENST00000453682 566 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC021146.5-201ENST00000503544 545 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC021678.1-201ENST00000505195 936 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP380-201ENST00000517190 98 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 DUXAP2-201ENST00000519198 589 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 C1DP5-201ENST00000525775 383 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC073657.2-201ENST00000605661 303 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC019176.2-201ENST00000611579 315 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 STMN1P1-201ENST00000617809 440 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 RNU6-156P-201ENST00000621869 107 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 MTCO1P12-201ENST00000414273 1543 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 FAM35CP-201ENST00000554755 2470 ntBASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC65Q8IXS2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms