Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ASNSP1-201ENST00000518311 1939 ntBASIC3.91□□□□□ -1.78
SHFQ7M4L6 AC027287.1-201ENST00000553115 1453 ntBASIC3.91□□□□□ -1.78
SHFQ7M4L6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.91□□□□□ -1.78
SHFQ7M4L6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHFQ7M4L6 MAPK10-253ENST00000641010 4072 ntBASIC3.9□□□□□ -1.78
SHFQ7M4L6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.9□□□□□ -1.78
SHFQ7M4L6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHFQ7M4L6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHFQ7M4L6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SHFQ7M4L6 AC097504.1-201ENST00000515103 2415 ntBASIC3.9□□□□□ -1.78
SHFQ7M4L6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 RNA5SP388-201ENST00000362584 119 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 RN7SKP269-201ENST00000365545 319 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 RNU6-952P-201ENST00000391164 108 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL355379.1-201ENST00000405542 640 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 HMGB1P11-201ENST00000413899 637 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 TPMTP2-201ENST00000414372 726 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC104837.2-201ENST00000427236 424 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC114495.1-201ENST00000441274 436 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL831737.1-201ENST00000441288 271 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL357520.1-201ENST00000441557 453 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 BMI1P1-201ENST00000445879 941 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 COX6CP12-201ENST00000446748 202 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 MTCO1P27-201ENST00000448269 226 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 RPL35AP15-201ENST00000468042 339 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 PABPC1P3-201ENST00000469174 459 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 RPS4XP14-201ENST00000493072 781 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC090453.1-201ENST00000495560 436 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC108145.1-201ENST00000503770 153 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC093809.1-201ENST00000509155 340 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 PARP4P3-201ENST00000510265 317 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 MTCO2P32-201ENST00000514865 403 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 RN7SKP277-201ENST00000516895 283 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC022790.1-201ENST00000522872 204 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 HSPA8P13-201ENST00000523715 472 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 HMGB3P26-201ENST00000560051 582 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC016180.1-201ENST00000567945 403 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC022146.1-201ENST00000595307 847 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 MIR6891-201ENST00000618788 93 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC009318.4-201ENST00000620496 486 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC018445.2-201ENST00000622987 260 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC092656.1-203ENST00000624134 423 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC018555.1-201ENST00000567548 1980 ntBASIC3.9□□□□□ -1.79
SHFQ7M4L6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SHFQ7M4L6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHFQ7M4L6 AC093535.2-201ENST00000624769 2326 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 AL022578.1-201ENST00000439330 1433 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHFQ7M4L6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHFQ7M4L6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 RPL23AP57-201ENST00000332361 466 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 RNU5F-6P-201ENST00000362979 116 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 AC097374.1-203ENST00000400783 485 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 RN7SKP106-201ENST00000410832 272 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 PGBD4P8-201ENST00000412993 562 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 RPL31P2-201ENST00000413849 377 ntBASIC3.89□□□□□ -1.79
SHFQ7M4L6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.89□□□□□ -1.79
SHFQ7M4L6 CYP4F29P-201ENST00000420685 446 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms