Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 MIR486-1-201ENST00000612171 68 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AL110115.1-201ENST00000614396 364 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
RIF1Q5UIP0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RIF1Q5UIP0 AC017007.4-201ENST00000503353 1352 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 RNY1P10-201ENST00000363268 113 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.56□□□□□ -2
RIF1Q5UIP0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.56□□□□□ -2
RIF1Q5UIP0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.56□□□□□ -2
RIF1Q5UIP0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.56□□□□□ -2
RIF1Q5UIP0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.56□□□□□ -2
RIF1Q5UIP0 AC007424.1-203ENST00000554613 687 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 ISCA1P3-201ENST00000577104 373 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AC022884.3-201ENST00000579571 248 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AC004696.1-201ENST00000614345 607 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AC010480.1-201ENST00000624823 684 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.55□□□□□ -2
RIF1Q5UIP0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.55□□□□□ -2
RIF1Q5UIP0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.55□□□□□ -2
RIF1Q5UIP0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
RIF1Q5UIP0 AC112673.1-201ENST00000513168 575 ntBASIC2.55□□□□□ -2
RIF1Q5UIP0 AC010198.2-201ENST00000550612 259 ntBASIC2.55□□□□□ -2
RIF1Q5UIP0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.55□□□□□ -2
RIF1Q5UIP0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.55□□□□□ -2
RIF1Q5UIP0 AC009039.2-201ENST00000624524 529 ntBASIC2.55□□□□□ -2
RIF1Q5UIP0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RIF1Q5UIP0 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
RIF1Q5UIP0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIF1Q5UIP0 RPL23AP4-201ENST00000427757 463 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 NANOGP6-201ENST00000429190 847 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AC007677.1-201ENST00000445757 515 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 MTCO1P42-201ENST00000457379 726 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.54□□□□□ -2
RIF1Q5UIP0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RIF1Q5UIP0 AC106872.2-201ENST00000494303 480 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 BTG4P1-201ENST00000510421 183 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.54□□□□□ -2
RIF1Q5UIP0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RIF1Q5UIP0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.54□□□□□ -2
RIF1Q5UIP0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RIF1Q5UIP0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RIF1Q5UIP0 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
RIF1Q5UIP0 DDX18P3-201ENST00000404856 2007 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 RPL7P10-201ENST00000417407 739 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 NANOGP5-201ENST00000424456 877 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 PRELID3BP7-201ENST00000503606 469 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RIF1Q5UIP0 HPRT1P3-201ENST00000539521 576 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AL139395.1-201ENST00000603662 160 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AL136981.2-201ENST00000617319 734 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 AC016542.2-201ENST00000624201 619 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIF1Q5UIP0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
RIF1Q5UIP0 OR10AB1P-202ENST00000641219 1686 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.54□□□□□ -2
RIF1Q5UIP0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.54□□□□□ -2
RIF1Q5UIP0 AL049555.1-201ENST00000562834 1933 ntBASIC2.54□□□□□ -2
RIF1Q5UIP0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RIF1Q5UIP0 SNORA26.9-201ENST00000391322 122 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 HSPE1P16-201ENST00000426640 348 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AP001636.2-201ENST00000525517 696 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AC074029.1-201ENST00000552531 1044 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.53□□□□□ -2
RIF1Q5UIP0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.53□□□□□ -2
RIF1Q5UIP0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 FAM35DP-201ENST00000323387 2712 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.53□□□□□ -2
RIF1Q5UIP0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RIF1Q5UIP0 RNA5SP31-201ENST00000411144 127 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.53□□□□□ -2
RIF1Q5UIP0 MTCO3P20-201ENST00000454926 688 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 RNA5SP217-201ENST00000515959 91 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.53□□□□□ -2
RIF1Q5UIP0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.53□□□□□ -2
RIF1Q5UIP0 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.53□□□□□ -2
RIF1Q5UIP0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
RIF1Q5UIP0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.53□□□□□ -2.01
RIF1Q5UIP0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
RIF1Q5UIP0 AL356292.1-201ENST00000283110 373 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms