Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.36□□□□□ -2.03
CCL20P78556 RNA5SP468-201ENST00000516782 93 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.36□□□□□ -2.03
CCL20P78556 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.36□□□□□ -2.03
CCL20P78556 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCL20P78556 AL442163.2-201ENST00000553912 710 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.36□□□□□ -2.03
CCL20P78556 RPL21P12-201ENST00000559810 515 ntBASIC2.36□□□□□ -2.03
CCL20P78556 MTCYBP28-201ENST00000566728 1132 ntBASIC2.36□□□□□ -2.03
CCL20P78556 MIR5685-201ENST00000579080 79 ntBASIC2.36□□□□□ -2.03
CCL20P78556 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCL20P78556 PRELID3BP8-201ENST00000604148 295 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AC015849.2-201ENST00000605738 409 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.36□□□□□ -2.03
CCL20P78556 AL021707.7-201ENST00000607991 416 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AL445423.1-201ENST00000609941 536 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AL590240.3-201ENST00000621416 943 ntBASIC2.36□□□□□ -2.03
CCL20P78556 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.36□□□□□ -2.03
CCL20P78556 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.36□□□□□ -2.03
CCL20P78556 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCL20P78556 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.36□□□□□ -2.03
CCL20P78556 AL122126.1-201ENST00000546905 1318 ntBASIC2.36□□□□□ -2.03
CCL20P78556 AL359893.1-201ENST00000447628 1580 ntBASIC2.36□□□□□ -2.03
CCL20P78556 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CCL20P78556 MTND4P8-201ENST00000514997 1362 ntBASIC2.36□□□□□ -2.03
CCL20P78556 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCL20P78556 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.35□□□□□ -2.03
CCL20P78556 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 AC002546.1-201ENST00000588041 2504 ntBASIC2.35□□□□□ -2.03
CCL20P78556 API5P2-201ENST00000397055 1498 ntBASIC2.35□□□□□ -2.03
CCL20P78556 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
CCL20P78556 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 AC016716.1-201ENST00000265882 708 ntBASIC2.35□□□□□ -2.03
CCL20P78556 OR1S2-201ENST00000302592 978 ntBASIC2.35□□□□□ -2.03
CCL20P78556 RNU1-35P-201ENST00000362782 153 ntBASIC2.35□□□□□ -2.03
CCL20P78556 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 DSTNP4-201ENST00000399472 474 ntBASIC2.35□□□□□ -2.03
CCL20P78556 U3.42-201ENST00000408746 214 ntBASIC2.35□□□□□ -2.03
CCL20P78556 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.35□□□□□ -2.03
CCL20P78556 BX323014.1-201ENST00000412876 237 ntBASIC2.35□□□□□ -2.03
CCL20P78556 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.35□□□□□ -2.03
CCL20P78556 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.35□□□□□ -2.03
CCL20P78556 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.35□□□□□ -2.03
CCL20P78556 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.35□□□□□ -2.03
CCL20P78556 AL513175.1-201ENST00000431492 780 ntBASIC2.35□□□□□ -2.03
CCL20P78556 KCTD10P1-201ENST00000434203 625 ntBASIC2.35□□□□□ -2.03
CCL20P78556 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.35□□□□□ -2.03
CCL20P78556 TPT1P12-201ENST00000448968 492 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC140076.1-201ENST00000449897 361 ntBASIC2.35□□□□□ -2.03
CCL20P78556 RPL23AP15-201ENST00000450202 459 ntBASIC2.35□□□□□ -2.03
CCL20P78556 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.35□□□□□ -2.03
CCL20P78556 HMGB1P25-201ENST00000468402 607 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC073522.1-201ENST00000483312 377 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC090543.1-201ENST00000492168 485 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC231760.1-201ENST00000498002 260 ntBASIC2.35□□□□□ -2.03
CCL20P78556 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.35□□□□□ -2.03
CCL20P78556 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.35□□□□□ -2.03
CCL20P78556 SNORA31.13-201ENST00000516624 135 ntBASIC2.35□□□□□ -2.03
CCL20P78556 SNORA31.20-201ENST00000517111 133 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.35□□□□□ -2.03
CCL20P78556 IGKV2D-36-201ENST00000518643 226 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 EIF1AXP2-201ENST00000555940 413 ntBASIC2.35□□□□□ -2.03
CCL20P78556 HSPE1P5-201ENST00000561489 272 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC034105.3-201ENST00000565294 442 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC012182.1-201ENST00000570133 895 ntBASIC2.35□□□□□ -2.03
CCL20P78556 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 MIR4276-201ENST00000584832 70 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC073657.2-201ENST00000605661 303 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC092354.2-201ENST00000607786 514 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC068831.7-201ENST00000616954 363 ntBASIC2.35□□□□□ -2.03
CCL20P78556 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.35□□□□□ -2.03
CCL20P78556 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 AC110774.1-201ENST00000623567 2018 ntBASIC2.35□□□□□ -2.03
CCL20P78556 MTND5P28-201ENST00000438005 1594 ntBASIC2.35□□□□□ -2.03
CCL20P78556 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCL20P78556 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CCL20P78556 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 RNU6-263P-201ENST00000363811 107 ntBASIC2.34□□□□□ -2.03
CCL20P78556 RNU6-374P-201ENST00000364146 108 ntBASIC2.34□□□□□ -2.03
CCL20P78556 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CCL20P78556 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCL20P78556 PPIAP31-201ENST00000405422 495 ntBASIC2.34□□□□□ -2.03
CCL20P78556 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 AL353692.2-201ENST00000407054 335 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms