Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC015917.1-201ENST00000579654 510 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC011468.4-201ENST00000603942 409 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC006386.2-201ENST00000624491 75 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC012005.1-201ENST00000624575 75 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 U6.107-201ENST00000637108 79 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNA1P78396 ZNF807-201ENST00000328088 1707 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCNA1P78396 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CCNA1P78396 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 AC009501.3-201ENST00000605001 1352 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 OR5BR1P-201ENST00000524992 1330 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCNA1P78396 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 RNU6-1181P-201ENST00000384191 106 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 Y_RNA.510-201ENST00000384511 114 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 MIR591-201ENST00000385290 95 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 AC244453.4-201ENST00000419150 388 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 ELOCP13-201ENST00000443934 329 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 RN7SL330P-201ENST00000469709 307 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNA1P78396 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNA1P78396 AP006245.1-201ENST00000522549 120 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 OR5AK3P-201ENST00000527486 1297 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 AP002404.1-201ENST00000532005 451 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNA1P78396 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNA1P78396 BNIP3P38-201ENST00000601117 544 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCNA1P78396 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNA1P78396 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
CCNA1P78396 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNA1P78396 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CCNA1P78396 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCNA1P78396 MTND4P10-201ENST00000446199 1363 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 RNU6-7-201ENST00000364784 107 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 RNU6-8-201ENST00000365467 107 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CCNA1P78396 RPS26P56-201ENST00000444468 240 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 AC008264.1-201ENST00000447612 367 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.78□□□□□ -1.8
CCNA1P78396 RN7SL863P-201ENST00000462370 296 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC016065.2-201ENST00000514530 444 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 RN7SKP244-201ENST00000516513 307 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC113192.3-201ENST00000529152 742 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 AC005476.1-201ENST00000554427 397 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNA1P78396 MTCYBP28-201ENST00000566728 1132 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNA1P78396 AC006539.2-201ENST00000601729 572 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
CCNA1P78396 AP001350.1-201ENST00000601906 1524 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCNA1P78396 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
CCNA1P78396 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNA1P78396 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 RNU6-1243P-201ENST00000364028 107 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 RPL21P66-201ENST00000426566 466 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AL513175.1-201ENST00000431492 780 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 MTCO1P43-201ENST00000431831 488 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 SKP1P1-201ENST00000438081 489 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNA1P78396 ATP5C1P1-201ENST00000441945 895 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC140076.1-201ENST00000449897 361 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 HMGN2P16-201ENST00000456802 261 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 SYPL1P1-201ENST00000473622 768 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 RPL23AP55-201ENST00000498163 452 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC097462.2-201ENST00000504623 481 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms