Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 RNF138P1-201ENST00000502765 546 ntBASIC3.48□□□□□ -1.85
CDH4P55283 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 RN7SKP244-201ENST00000516513 307 ntBASIC3.48□□□□□ -1.85
CDH4P55283 IGKV2D-36-201ENST00000518643 226 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH4P55283 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 AC005412.1-201ENST00000580812 1049 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 VN1R88P-201ENST00000596787 292 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH4P55283 IGHV3-29-201ENST00000604817 344 ntBASIC3.48□□□□□ -1.85
CDH4P55283 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 AC021851.1-201ENST00000608537 1082 ntBASIC3.48□□□□□ -1.85
CDH4P55283 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC006213.5-201ENST00000619673 288 ntBASIC3.48□□□□□ -1.85
CDH4P55283 AC110801.1-201ENST00000623590 212 ntBASIC3.48□□□□□ -1.85
CDH4P55283 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 AC127502.3-201ENST00000636170 1206 ntBASIC3.48□□□□□ -1.85
CDH4P55283 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.48□□□□□ -1.85
CDH4P55283 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 AL592494.2-201ENST00000425455 1548 ntBASIC3.48□□□□□ -1.85
CDH4P55283 ZNF37BP-203ENST00000452306 1352 ntBASIC3.48□□□□□ -1.85
CDH4P55283 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
CDH4P55283 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH4P55283 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDH4P55283 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH4P55283 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 AC008432.1-201ENST00000615912 1320 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AL359893.1-201ENST00000447628 1580 ntBASIC3.47□□□□□ -1.85
CDH4P55283 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH4P55283 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH4P55283 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDH4P55283 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH4P55283 RNU6-444P-201ENST00000383988 108 ntBASIC3.47□□□□□ -1.85
CDH4P55283 SSXP10-201ENST00000402595 565 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AL138880.1-201ENST00000405824 642 ntBASIC3.47□□□□□ -1.85
CDH4P55283 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 AL445183.3-201ENST00000414168 502 ntBASIC3.47□□□□□ -1.85
CDH4P55283 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH4P55283 NEK4P1-201ENST00000433383 879 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH4P55283 AC089999.1-201ENST00000460336 374 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 RPL31P13-201ENST00000484151 370 ntBASIC3.47□□□□□ -1.85
CDH4P55283 HMGB1P38-201ENST00000490557 577 ntBASIC3.47□□□□□ -1.85
CDH4P55283 APOOP4-201ENST00000513530 597 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 AC107954.1-201ENST00000565906 727 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH4P55283 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH4P55283 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH4P55283 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDH4P55283 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH4P55283 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CDH4P55283 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH4P55283 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
CDH4P55283 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.85
CDH4P55283 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDH4P55283 SAGE4P-201ENST00000442271 3381 ntBASIC3.46□□□□□ -1.85
CDH4P55283 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
CDH4P55283 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RNU6-792P-201ENST00000363490 107 ntBASIC3.46□□□□□ -1.86
CDH4P55283 SNORA51.2-201ENST00000364595 132 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RNA5SP267-201ENST00000364893 126 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AL121972.1-201ENST00000402023 252 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RNU4-27P-201ENST00000410889 139 ntBASIC3.46□□□□□ -1.86
CDH4P55283 BX323014.1-201ENST00000412876 237 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC126124.2-201ENST00000413542 321 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RPL31P2-201ENST00000413849 377 ntBASIC3.46□□□□□ -1.86
CDH4P55283 UBE2V1P9-201ENST00000414760 368 ntBASIC3.46□□□□□ -1.86
CDH4P55283 TOMM22P1-201ENST00000418578 312 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC008280.1-201ENST00000418851 412 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AL121882.1-201ENST00000422893 417 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH4P55283 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 AC005002.1-201ENST00000447458 540 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms