Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 RN7SKP114-201ENST00000410327 279 ntBASIC5.84□□□□□ -1.47
USP11P51784 RNU2-8P-201ENST00000410727 190 ntBASIC5.84□□□□□ -1.47
USP11P51784 AL358176.2-201ENST00000425769 204 ntBASIC5.84□□□□□ -1.47
USP11P51784 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.84□□□□□ -1.47
USP11P51784 CACYBPP2-201ENST00000453625 678 ntBASIC5.84□□□□□ -1.47
USP11P51784 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.84□□□□□ -1.47
USP11P51784 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.84□□□□□ -1.47
USP11P51784 AL590639.1-201ENST00000456484 337 ntBASIC5.84□□□□□ -1.47
USP11P51784 MTND4P17-201ENST00000470444 350 ntBASIC5.84□□□□□ -1.47
USP11P51784 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.84□□□□□ -1.47
USP11P51784 GAPDHP56-201ENST00000506031 988 ntBASIC5.84□□□□□ -1.47
USP11P51784 AL671862.1-201ENST00000515851 349 ntBASIC5.84□□□□□ -1.47
USP11P51784 RNU6-1314P-201ENST00000517139 104 ntBASIC5.84□□□□□ -1.47
USP11P51784 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.84□□□□□ -1.47
USP11P51784 OR5M2P-201ENST00000529003 936 ntBASIC5.84□□□□□ -1.47
USP11P51784 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.84□□□□□ -1.47
USP11P51784 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.84□□□□□ -1.47
USP11P51784 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.84□□□□□ -1.47
USP11P51784 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.84□□□□□ -1.47
USP11P51784 MIR3691-201ENST00000578066 90 ntBASIC5.84□□□□□ -1.47
USP11P51784 AC022884.2-201ENST00000578535 580 ntBASIC5.84□□□□□ -1.47
USP11P51784 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.84□□□□□ -1.47
USP11P51784 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.84□□□□□ -1.47
USP11P51784 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.84□□□□□ -1.47
USP11P51784 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.84□□□□□ -1.47
USP11P51784 AC018445.2-201ENST00000622987 260 ntBASIC5.84□□□□□ -1.47
USP11P51784 AL078596.1-201ENST00000624856 447 ntBASIC5.84□□□□□ -1.47
USP11P51784 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP11P51784 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.84□□□□□ -1.47
USP11P51784 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP11P51784 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
USP11P51784 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
USP11P51784 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.84□□□□□ -1.48
USP11P51784 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP11P51784 RIOK3P1-201ENST00000418778 1528 ntBASIC5.84□□□□□ -1.48
USP11P51784 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.84□□□□□ -1.48
USP11P51784 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
USP11P51784 HSPA8P18-201ENST00000439846 1928 ntBASIC5.84□□□□□ -1.48
USP11P51784 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USP11P51784 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 AC007996.1-201ENST00000620414 2821 ntBASIC5.83□□□□□ -1.48
USP11P51784 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.83□□□□□ -1.48
USP11P51784 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.83□□□□□ -1.48
USP11P51784 RNA5SP305-201ENST00000362665 119 ntBASIC5.83□□□□□ -1.48
USP11P51784 RN7SKP113-201ENST00000363891 295 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU4-1-201ENST00000363925 141 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU1-106P-201ENST00000384382 164 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU6-1151P-201ENST00000384684 107 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU6-331P-201ENST00000384724 107 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU6-952P-201ENST00000391164 108 ntBASIC5.83□□□□□ -1.48
USP11P51784 AL356057.3-201ENST00000402607 340 ntBASIC5.83□□□□□ -1.48
USP11P51784 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 RNU2-28P-201ENST00000410457 189 ntBASIC5.83□□□□□ -1.48
USP11P51784 RPL23AP27-201ENST00000415161 451 ntBASIC5.83□□□□□ -1.48
USP11P51784 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.83□□□□□ -1.48
USP11P51784 NUP35P1-201ENST00000422734 947 ntBASIC5.83□□□□□ -1.48
USP11P51784 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.83□□□□□ -1.48
USP11P51784 MRPS17P3-201ENST00000465453 385 ntBASIC5.83□□□□□ -1.48
USP11P51784 AL161747.1-201ENST00000480068 358 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC233702.1-201ENST00000482905 502 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC002456.2-201ENST00000509356 380 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC005741.1-201ENST00000511094 432 ntBASIC5.83□□□□□ -1.48
USP11P51784 SNORD60.2-201ENST00000516883 86 ntBASIC5.83□□□□□ -1.48
USP11P51784 RNU6-201P-201ENST00000517100 61 ntBASIC5.83□□□□□ -1.48
USP11P51784 SUB1P1-201ENST00000524415 382 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC092490.3-201ENST00000545370 572 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.83□□□□□ -1.48
USP11P51784 HMGN2P6-201ENST00000551091 273 ntBASIC5.83□□□□□ -1.48
USP11P51784 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USP11P51784 AL389895.1-201ENST00000554127 252 ntBASIC5.83□□□□□ -1.48
USP11P51784 AL359219.2-201ENST00000555184 348 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 AC099489.2-201ENST00000574976 260 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC016925.2-201ENST00000605108 242 ntBASIC5.83□□□□□ -1.48
USP11P51784 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.83□□□□□ -1.48
USP11P51784 AC078899.5-201ENST00000612475 178 ntBASIC5.83□□□□□ -1.48
USP11P51784 MIR6730-201ENST00000622213 67 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC040168.1-201ENST00000623594 991 ntBASIC5.83□□□□□ -1.48
USP11P51784 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 SMG1P7-201ENST00000565246 2704 ntBASIC5.83□□□□□ -1.48
USP11P51784 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
USP11P51784 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
USP11P51784 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP11P51784 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
USP11P51784 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP11P51784 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.82□□□□□ -1.48
USP11P51784 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP11P51784 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
USP11P51784 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.82□□□□□ -1.48
USP11P51784 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP11P51784 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms