Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 IFNWP4-201ENST00000453148 294 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AC098824.1-201ENST00000453565 980 ntBASIC4.06□□□□□ -1.76
SOX2P48431 snoU13.20-201ENST00000459180 104 ntBASIC4.06□□□□□ -1.76
SOX2P48431 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 AC012158.1-204ENST00000483430 465 ntBASIC4.06□□□□□ -1.76
SOX2P48431 RN7SL30P-201ENST00000488416 306 ntBASIC4.06□□□□□ -1.76
SOX2P48431 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 STMN1P2-201ENST00000508435 439 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 RNU1-6P-201ENST00000516290 144 ntBASIC4.06□□□□□ -1.76
SOX2P48431 RN7SKP66-201ENST00000516681 231 ntBASIC4.06□□□□□ -1.76
SOX2P48431 RNU6-1003P-201ENST00000517099 105 ntBASIC4.06□□□□□ -1.76
SOX2P48431 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 EEF1B2P4-201ENST00000551398 348 ntBASIC4.06□□□□□ -1.76
SOX2P48431 RPL21P5-201ENST00000554662 472 ntBASIC4.06□□□□□ -1.76
SOX2P48431 ZNF519P2-201ENST00000557032 169 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.06□□□□□ -1.76
SOX2P48431 MIR3913-1-201ENST00000577744 102 ntBASIC4.06□□□□□ -1.76
SOX2P48431 MIR3691-201ENST00000578066 90 ntBASIC4.06□□□□□ -1.76
SOX2P48431 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AC007566.2-201ENST00000603642 413 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AL390208.1-201ENST00000605885 644 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC091979.2-201ENST00000607514 214 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.06□□□□□ -1.76
SOX2P48431 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.06□□□□□ -1.76
SOX2P48431 U4.5-201ENST00000617137 123 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC072046.2-201ENST00000618366 268 ntBASIC4.06□□□□□ -1.76
SOX2P48431 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SOX2P48431 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 AL049780.3-201ENST00000624612 1583 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC017104.4-201ENST00000636283 1592 ntBASIC4.06□□□□□ -1.76
SOX2P48431 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 CCT4P2-201ENST00000233836 1548 ntBASIC4.05□□□□□ -1.76
SOX2P48431 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 OR51H2P-202ENST00000641424 3046 ntBASIC4.05□□□□□ -1.76
SOX2P48431 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
SOX2P48431 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AL442639.1-201ENST00000625030 1899 ntBASIC4.05□□□□□ -1.76
SOX2P48431 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 AL161781.1-201ENST00000354277 403 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SOX2P48431 RN7SKP226-201ENST00000364912 300 ntBASIC4.05□□□□□ -1.76
SOX2P48431 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 SNORD115.1-201ENST00000391109 76 ntBASIC4.05□□□□□ -1.76
SOX2P48431 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.05□□□□□ -1.76
SOX2P48431 DPPA2P3-201ENST00000411853 655 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 RPL31P2-201ENST00000413849 377 ntBASIC4.05□□□□□ -1.76
SOX2P48431 C1DP2-201ENST00000418167 426 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC004690.1-201ENST00000418216 328 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AL356276.2-201ENST00000435919 558 ntBASIC4.05□□□□□ -1.76
SOX2P48431 SDCBPP1-201ENST00000440192 890 ntBASIC4.05□□□□□ -1.76
SOX2P48431 RABEPKP1-201ENST00000440529 1026 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 MTND6P13-201ENST00000443510 523 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 HMGB1P15-201ENST00000453854 435 ntBASIC4.05□□□□□ -1.76
SOX2P48431 SBDSP1-204ENST00000453858 737 ntBASIC4.05□□□□□ -1.76
SOX2P48431 COPS8P2-201ENST00000473228 627 ntBASIC4.05□□□□□ -1.76
SOX2P48431 BX284632.1-201ENST00000478218 541 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC093267.1-201ENST00000489176 961 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC025164.1-201ENST00000496249 478 ntBASIC4.05□□□□□ -1.76
SOX2P48431 RN7SL101P-201ENST00000496350 279 ntBASIC4.05□□□□□ -1.76
SOX2P48431 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 TXNP6-201ENST00000510190 310 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 RNA5SP446-201ENST00000515955 82 ntBASIC4.05□□□□□ -1.76
SOX2P48431 RN7SKP244-201ENST00000516513 307 ntBASIC4.05□□□□□ -1.76
SOX2P48431 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.05□□□□□ -1.76
SOX2P48431 RN7SKP147-201ENST00000517154 244 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AP003467.2-201ENST00000520175 319 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.05□□□□□ -1.76
SOX2P48431 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX2P48431 AC012146.2-201ENST00000576545 416 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms