Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU6-1192P-201ENST00000612197 107 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTPN6P29350 RNU6-489P-201ENST00000618289 107 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 AC006963.1-201ENST00000624003 1052 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN6P29350 AC106858.1-201ENST00000637497 429 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN6P29350 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN6P29350 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN6P29350 AC091152.2-201ENST00000591628 2569 ntBASIC3.55□□□□□ -1.84
PTPN6P29350 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTPN6P29350 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AL672296.1-201ENST00000427780 2158 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 RNU6-582P-201ENST00000362989 107 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 RNU6-236P-201ENST00000363886 106 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN6P29350 RN7SKP159-201ENST00000410657 292 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC096533.1-201ENST00000411645 353 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC007390.1-201ENST00000415722 356 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 MTCYBP32-201ENST00000427945 1084 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC092634.2-201ENST00000428146 1010 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 HMGN2P16-201ENST00000456802 261 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AP002812.1-201ENST00000495378 474 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 AC008837.1-201ENST00000511513 412 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 RNU6-885P-201ENST00000516607 104 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 RNU6-352P-201ENST00000516908 107 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC023632.4-201ENST00000517783 191 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 MTND5P21-201ENST00000531961 522 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN6P29350 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 GAS5-AS1-201ENST00000602767 694 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AC103881.1-201ENST00000603476 538 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AP005137.2-201ENST00000609238 400 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
PTPN6P29350 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN6P29350 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN6P29350 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PTPN6P29350 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN6P29350 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN6P29350 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN6P29350 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PTPN6P29350 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN6P29350 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 RPS4XP5-202ENST00000449995 1334 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN6P29350 RNU6-839P-201ENST00000363347 108 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 SNORA62.3-201ENST00000365110 153 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 SNORD116-23-201ENST00000384645 92 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 MIR30B-201ENST00000384850 88 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 MTHFD2P2-201ENST00000407725 247 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 RNA5SP56-201ENST00000410277 118 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 CYCSP19-201ENST00000411715 316 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 HSFY1P1-201ENST00000423928 1178 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN6P29350 AC006480.1-201ENST00000449887 378 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 NPM1P13-201ENST00000452663 865 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 NANOGP10-201ENST00000453325 895 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 RN7SL542P-201ENST00000467147 294 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN6P29350 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN6P29350 RNU1-45P-201ENST00000517191 141 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN6P29350 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
PTPN6P29350 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN6P29350 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN6P29350 AC093519.1-201ENST00000566109 298 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
PTPN6P29350 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN6P29350 MIR4429-201ENST00000580105 73 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 MIR4666A-201ENST00000580160 79 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC005412.1-201ENST00000580812 1049 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC107982.3-201ENST00000584957 985 ntBASIC3.53□□□□□ -1.84
PTPN6P29350 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms